G976733


Basic Information

Item Value
gene id G976733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39692863 ~ 39693126 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112336
ttattattttggtcaggccagggtgtgacatgggtttattatgtggtgtgttttgtcttggggtttttgtaggtattgggattgtggtatagtggggttgtctagaatagtctatggctgtctggagtggttctcaatcagaggcaggtgtttatcgttgtctctgattgggaaccatatttaggcagccgtattctttgagtgtttcgtgggtgattgttcctgtctcagtgtttgtttgcaccagaataggctgtttaggtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112336 True 264 lncRNA 0.43 1 39692863 39693126

Neighbor

gene id symbol gene type direction distance location
LOC118937443 NA coding upstream 32613 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 35866 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 59711 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 172097 39482495 ~ 39520766 (+)
LOC110535681 mapkapk5 coding upstream 455847 39199736 ~ 39237016 (+)
LOC110535018 LOC106580184 coding downstream 1784 39694910 ~ 39787287 (+)
LOC110536621 NA coding downstream 143080 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 248464 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 287582 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 291459 39984585 ~ 39990217 (+)
G976722 NA non-coding upstream 18234 39674362 ~ 39674629 (+)
G976719 NA non-coding upstream 21228 39671429 ~ 39671635 (+)
G976714 NA non-coding upstream 25526 39667070 ~ 39667337 (+)
G976396 NA non-coding upstream 58261 39634368 ~ 39634602 (+)
G976383 NA non-coding upstream 83098 39609432 ~ 39609765 (+)
G976911 NA non-coding downstream 106554 39799680 ~ 39799892 (+)
G976922 NA non-coding downstream 114672 39807798 ~ 39808057 (+)
G976925 NA non-coding downstream 115783 39808909 ~ 39809141 (+)
G976935 NA non-coding downstream 120939 39814065 ~ 39814607 (+)
G976960 NA non-coding downstream 155968 39849094 ~ 39849410 (+)
G976017 NA other upstream 634852 39057676 ~ 39058011 (+)
G974184 NA other upstream 1629763 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1649533 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1857528 37813177 ~ 37835340 (+)
G973918 NA other upstream 2013495 37651138 ~ 37679368 (+)
G978255 NA other downstream 1074710 40767836 ~ 40768229 (+)
G978396 NA other downstream 1309950 41003076 ~ 41016088 (+)
G979689 NA other downstream 2385366 42078492 ~ 42078855 (+)
G979965 NA other downstream 2835394 42528520 ~ 42533308 (+)
G980019 NA other downstream 2938698 42631824 ~ 42636709 (+)

Expression


Co-expression Network