G976911


Basic Information

Item Value
gene id G976911
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39799680 ~ 39799892 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112521
GGGTAGATTTCAGTATTAGGAAGCTGCAGAAAGACAAAGATTCTGGAGTGAAGGATTCTTTTATGGTAAACAGGTGGAAAAAATGTGAGGATTTGGCAATAGGATTTTCTCTCTGGAACCATAGGTACTTGGATTTGTGAAACAGGATTAGTTGGTGTGTAATAATATGGATGCTGTGGGGGTAGACTAAActctggtgtgtgtgagtgagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112521 True 213 lncRNA 0.40 1 39799680 39799892

Neighbor

gene id symbol gene type direction distance location
LOC110535018 LOC106580184 coding upstream 12393 39694910 ~ 39787287 (+)
LOC118937443 NA coding upstream 139430 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 142683 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 166528 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 278914 39482495 ~ 39520766 (+)
LOC110536621 NA coding downstream 36314 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 141698 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 180816 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 184693 39984585 ~ 39990217 (+)
LOC118937349 NA coding downstream 198573 39998465 ~ 40000628 (+)
G976733 NA non-coding upstream 106554 39692863 ~ 39693126 (+)
G976722 NA non-coding upstream 125051 39674362 ~ 39674629 (+)
G976719 NA non-coding upstream 128045 39671429 ~ 39671635 (+)
G976714 NA non-coding upstream 132343 39667070 ~ 39667337 (+)
G976396 NA non-coding upstream 165078 39634368 ~ 39634602 (+)
G976922 NA non-coding downstream 7906 39807798 ~ 39808057 (+)
G976925 NA non-coding downstream 9017 39808909 ~ 39809141 (+)
G976935 NA non-coding downstream 14173 39814065 ~ 39814607 (+)
G976960 NA non-coding downstream 49202 39849094 ~ 39849410 (+)
G976977 NA non-coding downstream 59824 39859716 ~ 39860089 (+)
G976017 NA other upstream 741669 39057676 ~ 39058011 (+)
G974184 NA other upstream 1736580 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1756350 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1964345 37813177 ~ 37835340 (+)
G973918 NA other upstream 2120312 37651138 ~ 37679368 (+)
G978255 NA other downstream 967944 40767836 ~ 40768229 (+)
G978396 NA other downstream 1203184 41003076 ~ 41016088 (+)
G979689 NA other downstream 2278600 42078492 ~ 42078855 (+)
G979965 NA other downstream 2728628 42528520 ~ 42533308 (+)
G980019 NA other downstream 2831932 42631824 ~ 42636709 (+)

Expression


Co-expression Network