G976922


Basic Information

Item Value
gene id G976922
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39807798 ~ 39808057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112533
GTGGAAGAGAAAAGACAACGGTTGAAGAAACAGGTGAGGAGAAAGAAGAAGCTACTGTGTAGTGACACTACTGTCATGGAGCGGCGCTGCCAAGAAGACTGGAGACGTCCTCAGCAGACACTGgcctccactcagacagcagcaGTGCAGCTGCAACAATGGCGCTTGTTTTCCAGACCCTTGGGATGATTCGGCCCCTACTGCTGATTTCAGGCATGAGCGTGTGTGATAAGGGAGCACTGGGTCTGATATGAGGAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112533 True 260 lncRNA 0.53 1 39807798 39808057

Neighbor

gene id symbol gene type direction distance location
LOC110535018 LOC106580184 coding upstream 20511 39694910 ~ 39787287 (+)
LOC118937443 NA coding upstream 147548 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 150801 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 174646 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 287032 39482495 ~ 39520766 (+)
LOC110536621 NA coding downstream 28149 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 133533 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 172651 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 176528 39984585 ~ 39990217 (+)
LOC118937349 NA coding downstream 190408 39998465 ~ 40000628 (+)
G976911 NA non-coding upstream 7906 39799680 ~ 39799892 (+)
G976733 NA non-coding upstream 114672 39692863 ~ 39693126 (+)
G976722 NA non-coding upstream 133169 39674362 ~ 39674629 (+)
G976719 NA non-coding upstream 136163 39671429 ~ 39671635 (+)
G976714 NA non-coding upstream 140461 39667070 ~ 39667337 (+)
G976925 NA non-coding downstream 852 39808909 ~ 39809141 (+)
G976935 NA non-coding downstream 6008 39814065 ~ 39814607 (+)
G976960 NA non-coding downstream 41037 39849094 ~ 39849410 (+)
G976977 NA non-coding downstream 51659 39859716 ~ 39860089 (+)
G977018 NA non-coding downstream 80926 39888983 ~ 39889199 (+)
G976017 NA other upstream 749787 39057676 ~ 39058011 (+)
G974184 NA other upstream 1744698 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1764468 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1972463 37813177 ~ 37835340 (+)
G973918 NA other upstream 2128430 37651138 ~ 37679368 (+)
G978255 NA other downstream 959779 40767836 ~ 40768229 (+)
G978396 NA other downstream 1195019 41003076 ~ 41016088 (+)
G979689 NA other downstream 2270435 42078492 ~ 42078855 (+)
G979965 NA other downstream 2720463 42528520 ~ 42533308 (+)
G980019 NA other downstream 2823767 42631824 ~ 42636709 (+)

Expression


Co-expression Network