G976925


Basic Information

Item Value
gene id G976925
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39808909 ~ 39809141 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112536
GGCCTCCGCGGTGTCACAACACGCACATGCACAGACACTCGAGAAGGactctctgttctgtgttttgcttTCTCTCAGTTGGAGACTTTTAGCACCAATACTTTTTTCCATGGCAGGCTGCGATATGCCATCTGTTCCTCGTGCTGTGGAACACACAGCTCCCTCAGGCAGTGACTTTGGTGTTTTTTTCACATGGTGGCAAAACTGTAAATTGGGTAAAATAACAGCCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112536 True 233 lncRNA 0.47 1 39808909 39809141

Neighbor

gene id symbol gene type direction distance location
LOC110535018 LOC106580184 coding upstream 21622 39694910 ~ 39787287 (+)
LOC118937443 NA coding upstream 148659 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 151912 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 175757 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 288143 39482495 ~ 39520766 (+)
LOC110536621 NA coding downstream 27065 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 132449 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 171567 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 175444 39984585 ~ 39990217 (+)
LOC118937349 NA coding downstream 189324 39998465 ~ 40000628 (+)
G976922 NA non-coding upstream 852 39807798 ~ 39808057 (+)
G976911 NA non-coding upstream 9017 39799680 ~ 39799892 (+)
G976733 NA non-coding upstream 115783 39692863 ~ 39693126 (+)
G976722 NA non-coding upstream 134280 39674362 ~ 39674629 (+)
G976719 NA non-coding upstream 137274 39671429 ~ 39671635 (+)
G976935 NA non-coding downstream 4924 39814065 ~ 39814607 (+)
G976960 NA non-coding downstream 39953 39849094 ~ 39849410 (+)
G976977 NA non-coding downstream 50575 39859716 ~ 39860089 (+)
G977018 NA non-coding downstream 79842 39888983 ~ 39889199 (+)
G977071 NA non-coding downstream 155123 39964264 ~ 39964696 (+)
G976017 NA other upstream 750898 39057676 ~ 39058011 (+)
G974184 NA other upstream 1745809 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1765579 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1973574 37813177 ~ 37835340 (+)
G973918 NA other upstream 2129541 37651138 ~ 37679368 (+)
G978255 NA other downstream 958695 40767836 ~ 40768229 (+)
G978396 NA other downstream 1193935 41003076 ~ 41016088 (+)
G979689 NA other downstream 2269351 42078492 ~ 42078855 (+)
G979965 NA other downstream 2719379 42528520 ~ 42533308 (+)
G980019 NA other downstream 2822683 42631824 ~ 42636709 (+)

Expression


Co-expression Network