G976935


Basic Information

Item Value
gene id G976935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39814065 ~ 39814607 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112546
aaacacctgggcccggtgtgtcccaggataaatacaccacttccccattcatggaggagactctctccatgcagacacctttatgGATTTTGTTGTGTTTCGTGGTGGTTTTTGGGTTGTTTGCTTTAGCaactttcaacaccctgcattatcacattcatgcatgcaaaacactcacttacactactgattaaacacaccattgtatattttccttagttgctttagttaataaatatatattttgttatatcttatctccacgttgtctcccttttgttacgtgCTTTGAGCCTGTTCGTGAcagttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacgtctgacttcaactgtacctgcgTTTTCTGTTGTCAGTTTGTCTCGTCAAGTCCTACCAGCATGTTCCTGTGTTTCCTGTGCTCTAGTTTTTGTTTTTCTTAGTCTTCCCATTTCTGATCTTTCTGCCTGTTCTGACCCTCATCCTGCCCGCTGTCCTGTACCGgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112546 True 543 lncRNA 0.41 1 39814065 39814607

Neighbor

gene id symbol gene type direction distance location
LOC110535018 LOC106580184 coding upstream 26778 39694910 ~ 39787287 (+)
LOC118937443 NA coding upstream 153815 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 157068 39655631 ~ 39656997 (+)
LOC110535016 NA coding upstream 180913 39626969 ~ 39633152 (+)
LOC110535687 LOC106580186 coding upstream 293299 39482495 ~ 39520766 (+)
LOC110536621 NA coding downstream 21599 39836206 ~ 39837832 (+)
LOC110535689 LOC106580183 coding downstream 126983 39941590 ~ 39949172 (+)
LOC110535690 LOC106580180 coding downstream 166101 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 169978 39984585 ~ 39990217 (+)
LOC118937349 NA coding downstream 183858 39998465 ~ 40000628 (+)
G976925 NA non-coding upstream 4924 39808909 ~ 39809141 (+)
G976922 NA non-coding upstream 6008 39807798 ~ 39808057 (+)
G976911 NA non-coding upstream 14173 39799680 ~ 39799892 (+)
G976733 NA non-coding upstream 120939 39692863 ~ 39693126 (+)
G976722 NA non-coding upstream 139436 39674362 ~ 39674629 (+)
G976960 NA non-coding downstream 34487 39849094 ~ 39849410 (+)
G976977 NA non-coding downstream 45109 39859716 ~ 39860089 (+)
G977018 NA non-coding downstream 74376 39888983 ~ 39889199 (+)
G977071 NA non-coding downstream 149657 39964264 ~ 39964696 (+)
G977115 NA non-coding downstream 229156 40043763 ~ 40044055 (+)
G976017 NA other upstream 756054 39057676 ~ 39058011 (+)
G974184 NA other upstream 1750965 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1770735 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 1978730 37813177 ~ 37835340 (+)
G973918 NA other upstream 2134697 37651138 ~ 37679368 (+)
G978255 NA other downstream 953229 40767836 ~ 40768229 (+)
G978396 NA other downstream 1188469 41003076 ~ 41016088 (+)
G979689 NA other downstream 2263885 42078492 ~ 42078855 (+)
G979965 NA other downstream 2713913 42528520 ~ 42533308 (+)
G980019 NA other downstream 2817217 42631824 ~ 42636709 (+)

Expression


Co-expression Network