XLOC_028761


Basic Information

Item Value
gene id XLOC_028761
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 21592244 ~ 21628998 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058202
GTAATTATGGAGATGCTGTGTGAAAGTGGGCCAGCTCCTCATAGACTCAGCAGGAGCTCTCCTTAAAAGGCCAGGATGGATGATGTCGACTGTCTTTTTTCCCTGTCTcgttctcgctctctctctctgaggAGGAGGAGAGGCCCAGTAAGCTTTGAGAATCTCATCATCTCATCAGAGAAGCTTATGATATGATGACTTCCAGGAGAAGAGgtaCATCAAGGTGCCCACTGGGTCTTCTACTTGATGTTTTTGAAAACCAGAATATTCCCTTTAATCTTAGCTGACGGATTGTAATCCTAAGGATGGTGAAGATTGGCAGAGCAGCACCTACAGATGGACATCACAGTTGAGTTCTCCACCTGCTCCACTACACAGGCCAACTTCTCTCATTGTGTGGGTTTAAATCAGCCCAATCGCTCTTTTATTTGACTGCTAACTGGAAACAATGAGAAATTTTGTTGTATAAAGTTAACTCTTAAATTTAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058202 True 489 lncRNA 0.43 2 21592244 21628998

Neighbor

gene id symbol gene type direction distance location
XLOC_028760 ppp1r12a coding downstream 8086 21488990 ~ 21584158 (-)
XLOC_028759 pawr coding downstream 125419 21323006 ~ 21466825 (-)
XLOC_028758 rassf8b coding downstream 1070803 20507105 ~ 20521441 (-)
XLOC_028757 napepld coding downstream 1106239 20480399 ~ 20486005 (-)
XLOC_028756 BX248410.1 coding downstream 1196074 20396049 ~ 20396170 (-)
XLOC_028762 NA coding upstream 5014 21634012 ~ 21647992 (-)
XLOC_028763 rps16 coding upstream 19012 21648010 ~ 21652812 (-)
XLOC_028764 BX569790.2 coding upstream 27247 21656245 ~ 21657106 (-)
XLOC_028765 lin7a coding upstream 122764 21751762 ~ 21851473 (-)
XLOC_028766 ppfia2 coding upstream 333318 21962316 ~ 22207873 (-)
XLOC_028746 NA non-coding downstream 1468186 20122913 ~ 20124058 (-)
XLOC_028741 NA non-coding downstream 1544360 20044867 ~ 20047884 (-)
XLOC_028736 NA non-coding downstream 1691111 19900015 ~ 19901133 (-)
XLOC_028733 NA non-coding downstream 2053154 19534461 ~ 19539090 (-)
XLOC_028767 BX537162.1 non-coding upstream 607360 22236358 ~ 22237294 (-)
XLOC_028768 NA non-coding upstream 653727 22282725 ~ 22291753 (-)
XLOC_028777 NA non-coding upstream 1490421 23119419 ~ 23125640 (-)

Expression


Co-expression Network