G977071


Basic Information

Item Value
gene id G977071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 39964264 ~ 39964696 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112698
catccaaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagaactggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaatgccATTTCTTatagatatccataaaaagtgttgtttaaagtttgccacaaggcacctgggaaacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaatttaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112698 True 433 lncRNA 0.43 1 39964264 39964696

Neighbor

gene id symbol gene type direction distance location
LOC110535689 LOC106580183 coding upstream 15092 39941590 ~ 39949172 (+)
LOC110536621 NA coding upstream 126432 39836206 ~ 39837832 (+)
LOC110535018 LOC106580184 coding upstream 176977 39694910 ~ 39787287 (+)
LOC118937443 NA coding upstream 304014 39657610 ~ 39660250 (+)
LOC118937442 NA coding upstream 307267 39655631 ~ 39656997 (+)
LOC110535690 LOC106580180 coding downstream 16012 39980708 ~ 39982968 (+)
LOC110535691 LOC106580179 coding downstream 19889 39984585 ~ 39990217 (+)
LOC118937349 NA coding downstream 33769 39998465 ~ 40000628 (+)
LOC118937386 NA coding downstream 40357 40005053 ~ 40014741 (+)
LOC110535019 LOC106580173 coding downstream 50770 40015466 ~ 40038754 (+)
G977018 NA non-coding upstream 75065 39888983 ~ 39889199 (+)
G976977 NA non-coding upstream 104175 39859716 ~ 39860089 (+)
G976960 NA non-coding upstream 114854 39849094 ~ 39849410 (+)
G976935 NA non-coding upstream 149657 39814065 ~ 39814607 (+)
G976925 NA non-coding upstream 155123 39808909 ~ 39809141 (+)
G977115 NA non-coding downstream 79067 40043763 ~ 40044055 (+)
G977120 NA non-coding downstream 91695 40056391 ~ 40056599 (+)
G977121 NA non-coding downstream 92155 40056851 ~ 40057062 (+)
G977122 NA non-coding downstream 92506 40057202 ~ 40057521 (+)
G977125 NA non-coding downstream 95835 40060531 ~ 40060800 (+)
G976017 NA other upstream 906253 39057676 ~ 39058011 (+)
G974184 NA other upstream 1901164 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 1920934 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 2128929 37813177 ~ 37835340 (+)
G973918 NA other upstream 2284896 37651138 ~ 37679368 (+)
G978255 NA other downstream 803140 40767836 ~ 40768229 (+)
G978396 NA other downstream 1038380 41003076 ~ 41016088 (+)
G979689 NA other downstream 2113796 42078492 ~ 42078855 (+)
G979965 NA other downstream 2563824 42528520 ~ 42533308 (+)
G980019 NA other downstream 2667128 42631824 ~ 42636709 (+)

Expression


Co-expression Network