G977115


Basic Information

Item Value
gene id G977115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 40043763 ~ 40044055 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112750
atacagtggggcaaaaaagtatttagtctgccaccaattgtgcaagttctcccacttaaaaagatgagaggcctgtaatttatcatagatacacttaaactatgacagacaaaatgaggggaaaaaaatcctgaaaatcacattgtaggatttttaatgaatttatttgcaaattatggtggaaaacttttgttattaaccaaatacttatttatctcaatactttgttatataccctttgttggcaatgacataggtcaaacattttctgaaagtcttcacaaggttttcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112750 True 293 lncRNA 0.32 1 40043763 40044055

Neighbor

gene id symbol gene type direction distance location
LOC110535019 LOC106580173 coding upstream 5009 40015466 ~ 40038754 (+)
LOC118937386 NA coding upstream 29022 40005053 ~ 40014741 (+)
LOC118937349 NA coding upstream 43135 39998465 ~ 40000628 (+)
LOC110535691 LOC106580179 coding upstream 53546 39984585 ~ 39990217 (+)
LOC110535690 LOC106580180 coding upstream 60795 39980708 ~ 39982968 (+)
grid2 LOC106580171 coding downstream 144266 40188321 ~ 40743994 (+)
LOC110536622 LOC106580274 coding downstream 704680 40748735 ~ 40750507 (+)
LOC110535695 LOC106580170 coding downstream 743272 40787327 ~ 40815032 (+)
LOC118937351 NA coding downstream 754535 40798590 ~ 40801895 (+)
LOC110535696 LOC106580169 coding downstream 782999 40827054 ~ 40835309 (+)
G977071 NA non-coding upstream 79067 39964264 ~ 39964696 (+)
G977018 NA non-coding upstream 154564 39888983 ~ 39889199 (+)
G976977 NA non-coding upstream 183674 39859716 ~ 39860089 (+)
G976960 NA non-coding upstream 194353 39849094 ~ 39849410 (+)
G976935 NA non-coding upstream 229156 39814065 ~ 39814607 (+)
G977120 NA non-coding downstream 12336 40056391 ~ 40056599 (+)
G977121 NA non-coding downstream 12796 40056851 ~ 40057062 (+)
G977122 NA non-coding downstream 13147 40057202 ~ 40057521 (+)
G977125 NA non-coding downstream 16476 40060531 ~ 40060800 (+)
G977142 NA non-coding downstream 39410 40083465 ~ 40083691 (+)
G976017 NA other upstream 985752 39057676 ~ 39058011 (+)
G974184 NA other upstream 1980663 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 2000433 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 2208428 37813177 ~ 37835340 (+)
G973918 NA other upstream 2364395 37651138 ~ 37679368 (+)
G978255 NA other downstream 723781 40767836 ~ 40768229 (+)
G978396 NA other downstream 959021 41003076 ~ 41016088 (+)
G979689 NA other downstream 2034437 42078492 ~ 42078855 (+)
G979965 NA other downstream 2484465 42528520 ~ 42533308 (+)
G980019 NA other downstream 2587769 42631824 ~ 42636709 (+)

Expression


Co-expression Network