G977120


Basic Information

Item Value
gene id G977120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 40056391 ~ 40056599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112755
GCAGAAGACTGATTAAAACAAGTTTTGAGTGCGTCATAGGGAAGTGTTTTTGTaaggatttgtttttattttcttgcATTCACTAACTTTGTGACATAACCTCATTGGTTCTTATGTATCCTAAAGATATATTATGCATTACGTAAAGAATTGCAAAACCGACATGACTGAGAAACAATTAATTGCCCTTGTATGAATGCAAGATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112755 True 209 lncRNA 0.33 1 40056391 40056599

Neighbor

gene id symbol gene type direction distance location
LOC110535019 LOC106580173 coding upstream 17637 40015466 ~ 40038754 (+)
LOC118937386 NA coding upstream 41650 40005053 ~ 40014741 (+)
LOC118937349 NA coding upstream 55763 39998465 ~ 40000628 (+)
LOC110535691 LOC106580179 coding upstream 66174 39984585 ~ 39990217 (+)
LOC110535690 LOC106580180 coding upstream 73423 39980708 ~ 39982968 (+)
grid2 LOC106580171 coding downstream 131722 40188321 ~ 40743994 (+)
LOC110536622 LOC106580274 coding downstream 692136 40748735 ~ 40750507 (+)
LOC110535695 LOC106580170 coding downstream 730728 40787327 ~ 40815032 (+)
LOC118937351 NA coding downstream 741991 40798590 ~ 40801895 (+)
LOC110535696 LOC106580169 coding downstream 770455 40827054 ~ 40835309 (+)
G977115 NA non-coding upstream 12336 40043763 ~ 40044055 (+)
G977071 NA non-coding upstream 91695 39964264 ~ 39964696 (+)
G977018 NA non-coding upstream 167192 39888983 ~ 39889199 (+)
G976977 NA non-coding upstream 196302 39859716 ~ 39860089 (+)
G976960 NA non-coding upstream 206981 39849094 ~ 39849410 (+)
G977121 NA non-coding downstream 252 40056851 ~ 40057062 (+)
G977122 NA non-coding downstream 603 40057202 ~ 40057521 (+)
G977125 NA non-coding downstream 3932 40060531 ~ 40060800 (+)
G977142 NA non-coding downstream 26866 40083465 ~ 40083691 (+)
G977146 NA non-coding downstream 46632 40103231 ~ 40103457 (+)
G976017 NA other upstream 998380 39057676 ~ 39058011 (+)
G974184 NA other upstream 1993291 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 2013061 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 2221056 37813177 ~ 37835340 (+)
G973918 NA other upstream 2377023 37651138 ~ 37679368 (+)
G978255 NA other downstream 711237 40767836 ~ 40768229 (+)
G978396 NA other downstream 946477 41003076 ~ 41016088 (+)
G979689 NA other downstream 2021893 42078492 ~ 42078855 (+)
G979965 NA other downstream 2471921 42528520 ~ 42533308 (+)
G980019 NA other downstream 2575225 42631824 ~ 42636709 (+)

Expression


Co-expression Network