G977122


Basic Information

Item Value
gene id G977122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 40057202 ~ 40057521 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1112757
ggggagcgttgctgcacagcttttttcagatatctccagagatgtttgatcgagttcaagtaagggctctgactgggccactcaagaacattcagagatttctcccaaagccactcctgtgttatcttggctgtgtgcttagggtcgttgtcctgttggaaggtgaaccgtcacccaagtctgaggtcctgagcgctctggagcaggttttgatgaaggatctttctgtaccttgctctgttcatctttccctcgatcctgactagtctcccagtcgctgccgctgaaaacatccccacagcatgatgctgccaccacca

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1112757 True 320 lncRNA 0.51 1 40057202 40057521

Neighbor

gene id symbol gene type direction distance location
LOC110535019 LOC106580173 coding upstream 18448 40015466 ~ 40038754 (+)
LOC118937386 NA coding upstream 42461 40005053 ~ 40014741 (+)
LOC118937349 NA coding upstream 56574 39998465 ~ 40000628 (+)
LOC110535691 LOC106580179 coding upstream 66985 39984585 ~ 39990217 (+)
LOC110535690 LOC106580180 coding upstream 74234 39980708 ~ 39982968 (+)
grid2 LOC106580171 coding downstream 130800 40188321 ~ 40743994 (+)
LOC110536622 LOC106580274 coding downstream 691214 40748735 ~ 40750507 (+)
LOC110535695 LOC106580170 coding downstream 729806 40787327 ~ 40815032 (+)
LOC118937351 NA coding downstream 741069 40798590 ~ 40801895 (+)
LOC110535696 LOC106580169 coding downstream 769533 40827054 ~ 40835309 (+)
G977121 NA non-coding upstream 140 40056851 ~ 40057062 (+)
G977120 NA non-coding upstream 603 40056391 ~ 40056599 (+)
G977115 NA non-coding upstream 13147 40043763 ~ 40044055 (+)
G977071 NA non-coding upstream 92506 39964264 ~ 39964696 (+)
G977018 NA non-coding upstream 168003 39888983 ~ 39889199 (+)
G977125 NA non-coding downstream 3010 40060531 ~ 40060800 (+)
G977142 NA non-coding downstream 25944 40083465 ~ 40083691 (+)
G977146 NA non-coding downstream 45710 40103231 ~ 40103457 (+)
G977156 NA non-coding downstream 69464 40126985 ~ 40127246 (+)
G977403 NA non-coding downstream 126066 40183587 ~ 40183816 (+)
G976017 NA other upstream 999191 39057676 ~ 39058011 (+)
G974184 NA other upstream 1994102 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 2013872 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 2221867 37813177 ~ 37835340 (+)
G973918 NA other upstream 2377834 37651138 ~ 37679368 (+)
G978255 NA other downstream 710315 40767836 ~ 40768229 (+)
G978396 NA other downstream 945555 41003076 ~ 41016088 (+)
G979689 NA other downstream 2020971 42078492 ~ 42078855 (+)
G979965 NA other downstream 2470999 42528520 ~ 42533308 (+)
G980019 NA other downstream 2574303 42631824 ~ 42636709 (+)

Expression


Co-expression Network