G978329


Basic Information

Item Value
gene id G978329
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 40885708 ~ 40890102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114013
ATTTACAAGCCTTTTAATAACTTCTGCAGTGCGGTACATCCAGGAGTTGGTGTGTGTGGTATACAAGGCATGCGTAGTGCATgaagacagagagtagagagtaacCATACAAACAAATAGACCCTGAAGAATAGGAGTGCTTTGCTTTGTTGTATTTTGCAGTCAATGTTCTTCCCTCTGCAGTCTTCATAGATCAGACTCTGAACCCTTTTTCCCCTTCCTGTTTCCCTGCCTGATGGTGTTTTGGCTGATCTGTTTGCAAACCTTTCACTTTCGACTTCTCCTGTTCAAGTGAGGCATGTAGTG

Function

NR:

description
PREDICTED: G kinase-anchoring protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114013 True 306 lncRNA 0.43 2 40885708 40890102

Neighbor

gene id symbol gene type direction distance location
LOC110535697 LOC106580168 coding upstream 9489 40845782 ~ 40876219 (+)
LOC110535696 LOC106580169 coding upstream 50399 40827054 ~ 40835309 (+)
LOC110535695 LOC106580170 coding upstream 70676 40787327 ~ 40815032 (+)
LOC118937351 NA coding upstream 83813 40798590 ~ 40801895 (+)
LOC110536622 LOC106580274 coding upstream 135201 40748735 ~ 40750507 (+)
arrdc3a LOC106580165 coding downstream 23022 40913124 ~ 40921426 (+)
LOC118937444 NA coding downstream 51898 40942000 ~ 40943238 (+)
lysmd3 LOC106580159 coding downstream 282032 41172134 ~ 41176136 (+)
mblac2 mblac2 coding downstream 294998 41185100 ~ 41188623 (+)
LOC110535023 nol6 coding downstream 676090 41566192 ~ 41567177 (+)
G978324 NA non-coding upstream 8771 40876676 ~ 40876937 (+)
G978312 NA non-coding upstream 22861 40858944 ~ 40862847 (+)
G978246 NA non-coding upstream 122359 40763089 ~ 40763349 (+)
G977409 NA non-coding upstream 697520 40187916 ~ 40188188 (+)
G978350 NA non-coding downstream 21151 40911253 ~ 40911476 (+)
G978357 NA non-coding downstream 37826 40927928 ~ 40928133 (+)
G978386 NA non-coding downstream 85321 40975423 ~ 40975839 (+)
G978387 LOC106580163 non-coding downstream 88646 40978748 ~ 41000277 (+)
G978479 NA non-coding downstream 216564 41106666 ~ 41106988 (+)
G978255 NA other upstream 117479 40767836 ~ 40768229 (+)
G976017 NA other upstream 1827697 39057676 ~ 39058011 (+)
G974184 NA other upstream 2822608 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 2842378 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 3050373 37813177 ~ 37835340 (+)
G978396 NA other downstream 112974 41003076 ~ 41016088 (+)
G979689 NA other downstream 1188390 42078492 ~ 42078855 (+)
G979965 NA other downstream 1638418 42528520 ~ 42533308 (+)
G980019 NA other downstream 1741722 42631824 ~ 42636709 (+)
G981690 NA other downstream 2770272 43660374 ~ 43715297 (+)

Expression


Co-expression Network