G978396


Basic Information

Item Value
gene id G978396
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41003076 ~ 41016088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114082
gaggagagatgaagaggcgGAGGAAAGGAAAGGTTCAGCCAGGGTGAAGAatggcatgaatgccaagcagGACTGGAGCAGAGGAGGAATGAACCAATGAGCCAGGAGAGAGCAAATACGGACAAAGGGCCGAGATACAACACAgcagagacgagagaggagagatacaacACAGCAGAGACGAGAGAATAGAGATACaacacagcagagaggagagaggagagaatagagatacaacacagcagagaggagagaggagagatacaacacagcagagaggagagaggagacaggagagatacAACACAGCAGAGACGAGAGAATAGAGATACaacacagcagagaggagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagaggagagaggagacaggagagatacAACACAGCAGAGACGAGAGAATAGAGATACaacacagcagagaggagagaggagagatacaacACAGCAGAGACGAGAGAATAGAGATACAACACAGCAGAGACGAGAGGGGAGAGATACaacacagcagagaggagagaggagagatacaacccagcagagaggagagaggagagatacaacccagcagagaggagagaggagagatacaacacagcagagacaagaaaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacACAGTAGAGACGAGAGATACaacacagcagagaggagagatacaacacagcagagacgagagaggagaggatagagatacaacacagcagagacgagagaggagagaatagagatacaacacaacagagaggagagatacaacacagcagagacgagagaggagagcatagagatacaacacagcagagacgagagaggagagatacaacacagcagagaggagagatacaacacagcagagacgagagaggagagaatagagatacAACACTgcagagacgagagaggagagaatagagatacaacacagcagagatgagagaggagagaatagagatacaacacaacagagaggagagatagaacacagcagagacgagagaggagagaatagagatacAACACTgcagagacgagagaggagagaatagagatacaacacagcagagacgagagaggagagaatagagatacaacacaacagagaggagagatagaacacagcagagacgagagaggagagaatagagatacaacacagcagagacgagagaggagagatacaacacatcagagacgagagaggagagatacaacACAGCAGAGACGAGAGAATAGAGATACAACACagcagagaggagggatacaacacagcagagacgagagaggagagaatagagatacACCACagcagagatgagagaggagataatagagatacaacacagcagagacgagagaggagagaatagagatacaacacagcagagacgagagaggagagaatagagatacACCACagcagagatgagagaggagagatacaacacagcagagacgagagaggagagaatagagatacaacacagcagagacgagagaggagagaatagagatacaacacagcagagacgagagaggagagatacaacATATCAGAGACGAGAGAATAGAGATACaacacagcagagaggagagaggagagatacaacACAGCATAGACGAGAGAATAGAGATACAACACAGCAGAGACGAGAGAATAGAGATACAACACAgcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacACAGCAGAGACGAGAGAATAGAGATACAACACAgcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagatgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagatacaacacagcagagacgagagaggagagacacaacacagcagagacgagagaggagagatacaacACAGCAGAGACGAGAGAGTAGAGATACAACAGCATCGCACAGAACTACATGCAGGGCTGTAAAGGGTCAATGTTCTACCCCTCCTTGCCAAACAGAGGGTAAcacccaccatcaccacccccgcCACTCAACCCCACCATCGGACCACAGCCCAGCAGACCAATAGAAGACAAGGAGGGCAGTGAGAGAGGGCAGACTCAGACCTACCCACAATCCCACAATGCCCGCCTGCCTCtcgagtgacagacagacagacaaacagacagac

Function

NR:

description
PREDICTED: basic salivary proline-rich protein 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114082 True 2533 TUCP 0.49 2 41003076 41016088

Neighbor

gene id symbol gene type direction distance location
LOC118937444 NA coding upstream 59838 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 81650 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 126857 40845782 ~ 40876219 (+)
LOC110535696 LOC106580169 coding upstream 167767 40827054 ~ 40835309 (+)
LOC110535695 LOC106580170 coding upstream 188044 40787327 ~ 40815032 (+)
lysmd3 LOC106580159 coding downstream 156046 41172134 ~ 41176136 (+)
mblac2 mblac2 coding downstream 169012 41185100 ~ 41188623 (+)
LOC110535023 nol6 coding downstream 550104 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 565639 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 579448 41595536 ~ 41604715 (+)
G978387 LOC106580163 non-coding upstream 2799 40978748 ~ 41000277 (+)
G978386 NA non-coding upstream 27237 40975423 ~ 40975839 (+)
G978357 NA non-coding upstream 74943 40927928 ~ 40928133 (+)
G978350 NA non-coding upstream 91600 40911253 ~ 40911476 (+)
G978329 NA non-coding upstream 112974 40885708 ~ 40890102 (+)
G978479 NA non-coding downstream 90578 41106666 ~ 41106988 (+)
G978488 NA non-coding downstream 98292 41114380 ~ 41124123 (+)
G978586 NA non-coding downstream 244955 41261043 ~ 41261242 (+)
G978588 NA non-coding downstream 247714 41263802 ~ 41264028 (+)
G978681 NA non-coding downstream 381240 41397328 ~ 41397623 (+)
G978255 NA other upstream 234847 40767836 ~ 40768229 (+)
G976017 NA other upstream 1945065 39057676 ~ 39058011 (+)
G974184 NA other upstream 2939976 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 2959746 37866715 ~ 38045713 (+)
lztfl1 LOC106590188 other upstream 3167741 37813177 ~ 37835340 (+)
G979689 NA other downstream 1062404 42078492 ~ 42078855 (+)
G979965 NA other downstream 1512432 42528520 ~ 42533308 (+)
G980019 NA other downstream 1615736 42631824 ~ 42636709 (+)
G981690 NA other downstream 2644286 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 3264837 44280925 ~ 44285969 (+)

Expression


Co-expression Network