G978479


Basic Information

Item Value
gene id G978479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41106666 ~ 41106988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114175
AGTCCTCGGGGCTGACTGCGGTGAACGGTGAGGTCCTGTAGCCAACCATGACTTTTCCCAACAGGCCTTGGGCCCTGGCCACCAGCAGGCGGACCTCTCCGTCCTCCTCATTGACCGTGACATGGGCAGGCTCTGCTGCCGGGCGGATCATCCCCTCAGCTGGCAGGCTGGACTGGAACTGGATCagacctgggagagagagagaggggtaccaGTAATCACAACAGCTGCTCATCCAGCCTCATAGAACAATACGCTTGTCGGAGattatgagagagagcgagagaggggtacCAGTAATCACAACAGCTGCTCATCCAGCC

Function

NR:

description
G-protein coupled receptor 98-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114175 True 323 lncRNA 0.59 1 41106666 41106988

Neighbor

gene id symbol gene type direction distance location
LOC118937444 NA coding upstream 163428 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 185240 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 230447 40845782 ~ 40876219 (+)
LOC110535696 LOC106580169 coding upstream 271357 40827054 ~ 40835309 (+)
LOC118937351 NA coding upstream 304771 40798590 ~ 40801895 (+)
lysmd3 LOC106580159 coding downstream 65146 41172134 ~ 41176136 (+)
mblac2 mblac2 coding downstream 78112 41185100 ~ 41188623 (+)
LOC110535023 nol6 coding downstream 459204 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 474739 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 488548 41595536 ~ 41604715 (+)
G978387 LOC106580163 non-coding upstream 106389 40978748 ~ 41000277 (+)
G978386 NA non-coding upstream 130827 40975423 ~ 40975839 (+)
G978357 NA non-coding upstream 178533 40927928 ~ 40928133 (+)
G978350 NA non-coding upstream 195190 40911253 ~ 40911476 (+)
G978329 NA non-coding upstream 216564 40885708 ~ 40890102 (+)
G978488 NA non-coding downstream 7392 41114380 ~ 41124123 (+)
G978586 NA non-coding downstream 154055 41261043 ~ 41261242 (+)
G978588 NA non-coding downstream 156814 41263802 ~ 41264028 (+)
G978681 NA non-coding downstream 290340 41397328 ~ 41397623 (+)
G978694 NA non-coding downstream 314504 41421492 ~ 41425683 (+)
G978396 NA other upstream 90578 41003076 ~ 41016088 (+)
G978255 NA other upstream 338437 40767836 ~ 40768229 (+)
G976017 NA other upstream 2048655 39057676 ~ 39058011 (+)
G974184 NA other upstream 3043566 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3063336 37866715 ~ 38045713 (+)
G979689 NA other downstream 971504 42078492 ~ 42078855 (+)
G979965 NA other downstream 1421532 42528520 ~ 42533308 (+)
G980019 NA other downstream 1524836 42631824 ~ 42636709 (+)
G981690 NA other downstream 2553386 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 3173937 44280925 ~ 44285969 (+)

Expression


Co-expression Network