G978735 (si:dkey-263f15.2)


Basic Information

Item Value
gene id G978735
gene name si:dkey-263f15.2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41473604 ~ 41499222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114455
CCTCCTGGCACACGCGGTACTGGTCAATGGCCCAGACAGTTGGCACGTGGGTGGCGAGCAGCTGGTACTGTGTGAGGGTTGCATTGCAGGCGCGGGCACAGATGAGCCTAGTCTTGCCCACCGCGTTGTCCCCTACCACAACACATTTAATGGTTTCCACGTTGGGCCGCTCATAGTCTGTGTCTATATCCATGGAGAGGgccATAACTTTGGACGTGTGCTGTCATGAATCTCCTGTGACGATCTGAAGGATCCGGTTACAGTCGATCCCCTCTACAGCGC

Function

NR:

description
PREDICTED: rho-related BTB domain-containing protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114455 True 282 lncRNA 0.56 2 41473604 41499222

Neighbor

gene id symbol gene type direction distance location
mblac2 mblac2 coding upstream 284981 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 297468 41172134 ~ 41176136 (+)
LOC118937444 NA coding upstream 530366 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 552178 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 597385 40845782 ~ 40876219 (+)
LOC110535023 nol6 coding downstream 66970 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 82505 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 96314 41595536 ~ 41604715 (+)
LOC118937352 NA coding downstream 127055 41626277 ~ 41632041 (+)
LOC118937445 NA coding downstream 170574 41669796 ~ 41699250 (+)
G978694 NA non-coding upstream 47921 41421492 ~ 41425683 (+)
G978681 NA non-coding upstream 75981 41397328 ~ 41397623 (+)
G978588 NA non-coding upstream 209576 41263802 ~ 41264028 (+)
G978586 NA non-coding upstream 212362 41261043 ~ 41261242 (+)
G978488 NA non-coding upstream 349481 41114380 ~ 41124123 (+)
G978751 NA non-coding downstream 4977 41504199 ~ 41504496 (+)
G978752 NA non-coding downstream 5496 41504718 ~ 41504975 (+)
G978754 NA non-coding downstream 8757 41507979 ~ 41508240 (+)
G978755 NA non-coding downstream 9088 41508310 ~ 41508592 (+)
G978756 NA non-coding downstream 9577 41508799 ~ 41509004 (+)
G978396 NA other upstream 457516 41003076 ~ 41016088 (+)
G978255 NA other upstream 705375 40767836 ~ 40768229 (+)
G976017 NA other upstream 2415593 39057676 ~ 39058011 (+)
G974184 NA other upstream 3410504 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3430274 37866715 ~ 38045713 (+)
G979689 NA other downstream 579270 42078492 ~ 42078855 (+)
G979965 NA other downstream 1029298 42528520 ~ 42533308 (+)
G980019 NA other downstream 1132602 42631824 ~ 42636709 (+)
G981690 NA other downstream 2161152 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2781703 44280925 ~ 44285969 (+)

Expression


Co-expression Network