G978754


Basic Information

Item Value
gene id G978754
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41507979 ~ 41508240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114474
CGACCCCCAACTcacttacacacagacacataccccACCCTATACCTACTGCCTCGAGGGGAACGAGGTTGGTCAGGCAGGTCTtatagggacaaacacacacacacacatcatccactCAGCGGGGAAAGGGACACACAGGTCAGCAGAGGTGCTCCTTATTGCATGGCCCGGTCAAGTGGCAGGTCTAATCTGATTAAGGATCCACTCAGCCTCTGTTCTAGGGGCTTAATTACGTGATGGGGCTGGGtcccggccaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114474 True 262 lncRNA 0.55 1 41507979 41508240

Neighbor

gene id symbol gene type direction distance location
mblac2 mblac2 coding upstream 319356 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 331843 41172134 ~ 41176136 (+)
LOC118937444 NA coding upstream 564741 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 586553 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 631760 40845782 ~ 40876219 (+)
LOC110535023 nol6 coding downstream 57952 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 73487 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 87296 41595536 ~ 41604715 (+)
LOC118937352 NA coding downstream 118037 41626277 ~ 41632041 (+)
LOC118937445 NA coding downstream 161556 41669796 ~ 41699250 (+)
G978752 NA non-coding upstream 3004 41504718 ~ 41504975 (+)
G978751 NA non-coding upstream 3483 41504199 ~ 41504496 (+)
G978735 si:dkey-263f15.2 non-coding upstream 8757 41473604 ~ 41499222 (+)
G978694 NA non-coding upstream 82296 41421492 ~ 41425683 (+)
G978681 NA non-coding upstream 110356 41397328 ~ 41397623 (+)
G978755 NA non-coding downstream 70 41508310 ~ 41508592 (+)
G978756 NA non-coding downstream 559 41508799 ~ 41509004 (+)
G978757 NA non-coding downstream 1276 41509516 ~ 41509717 (+)
G978758 NA non-coding downstream 2291 41510531 ~ 41511082 (+)
G978761 NA non-coding downstream 5699 41513939 ~ 41514350 (+)
G978396 NA other upstream 491891 41003076 ~ 41016088 (+)
G978255 NA other upstream 739750 40767836 ~ 40768229 (+)
G976017 NA other upstream 2449968 39057676 ~ 39058011 (+)
G974184 NA other upstream 3444879 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3464649 37866715 ~ 38045713 (+)
G979689 NA other downstream 570252 42078492 ~ 42078855 (+)
G979965 NA other downstream 1020280 42528520 ~ 42533308 (+)
G980019 NA other downstream 1123584 42631824 ~ 42636709 (+)
G981690 NA other downstream 2152134 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2772685 44280925 ~ 44285969 (+)

Expression


Co-expression Network