G978755


Basic Information

Item Value
gene id G978755
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41508310 ~ 41508592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114475
ggcacgcacatgaaaacacacacacgttttgttttactgtccttgtggggaccaaacaatttattcctattcaaaatcctattttccctaaccgtTAACcgttaaccttaaccataacatTACCCCTTactcttaaccctaaccataaacctaacccctagtttaaaatagcctttttccctTGTTAGGGCCagtgaaatgtccccacttgttcAAATGTTCTTTGTTTAACTATCCTTGTAAGGGCTTCTGGTCCACACAAGGAAAataaaaccaaaaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114475 True 283 lncRNA 0.39 1 41508310 41508592

Neighbor

gene id symbol gene type direction distance location
mblac2 mblac2 coding upstream 319687 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 332174 41172134 ~ 41176136 (+)
LOC118937444 NA coding upstream 565072 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 586884 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 632091 40845782 ~ 40876219 (+)
LOC110535023 nol6 coding downstream 57600 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 73135 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 86944 41595536 ~ 41604715 (+)
LOC118937352 NA coding downstream 117685 41626277 ~ 41632041 (+)
LOC118937445 NA coding downstream 161204 41669796 ~ 41699250 (+)
G978754 NA non-coding upstream 70 41507979 ~ 41508240 (+)
G978752 NA non-coding upstream 3335 41504718 ~ 41504975 (+)
G978751 NA non-coding upstream 3814 41504199 ~ 41504496 (+)
G978735 si:dkey-263f15.2 non-coding upstream 9088 41473604 ~ 41499222 (+)
G978694 NA non-coding upstream 82627 41421492 ~ 41425683 (+)
G978756 NA non-coding downstream 207 41508799 ~ 41509004 (+)
G978757 NA non-coding downstream 924 41509516 ~ 41509717 (+)
G978758 NA non-coding downstream 1939 41510531 ~ 41511082 (+)
G978761 NA non-coding downstream 5347 41513939 ~ 41514350 (+)
G978760 NA non-coding downstream 8030 41516622 ~ 41517221 (+)
G978396 NA other upstream 492222 41003076 ~ 41016088 (+)
G978255 NA other upstream 740081 40767836 ~ 40768229 (+)
G976017 NA other upstream 2450299 39057676 ~ 39058011 (+)
G974184 NA other upstream 3445210 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3464980 37866715 ~ 38045713 (+)
G979689 NA other downstream 569900 42078492 ~ 42078855 (+)
G979965 NA other downstream 1019928 42528520 ~ 42533308 (+)
G980019 NA other downstream 1123232 42631824 ~ 42636709 (+)
G981690 NA other downstream 2151782 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2772333 44280925 ~ 44285969 (+)

Expression


Co-expression Network