G978760


Basic Information

Item Value
gene id G978760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41516622 ~ 41517221 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114480
agttagtatcaccactttattttaagaatgtgaaatgtcagaataatagtagagagaacgatttatttcagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttggtagcattgcctcaaaatggtttaacttgggtctaaTGTTTCtcgtagccttccacaatcttcccacaatacgttgggtgaattttggcccattcctcctgacagagctggtgtaactgagttaggtttgtaggcctccttgctcgcacacactttttcagttctgcccacaaatgttctatgcgattgaggtcagggctttgtgatgaccactccaatactttgactttgttgtccttaggcgaTTTTGAAACCAcccctttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccaagttttaacttcctgactgatgtcttgagatgttgcttcaatatatccacataattttccttcttcatgatgccatttatttagTGACGTGCACCaggtggatatagatacttttgtacccgtttcctccagcatcgtcacaaggtcctttgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114480 True 600 lncRNA 0.41 1 41516622 41517221

Neighbor

gene id symbol gene type direction distance location
mblac2 mblac2 coding upstream 327999 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 340486 41172134 ~ 41176136 (+)
LOC118937444 NA coding upstream 573384 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 595196 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 640403 40845782 ~ 40876219 (+)
LOC110535023 nol6 coding downstream 48971 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 64506 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 78315 41595536 ~ 41604715 (+)
LOC118937352 NA coding downstream 109056 41626277 ~ 41632041 (+)
LOC118937445 NA coding downstream 152575 41669796 ~ 41699250 (+)
G978761 NA non-coding upstream 2272 41513939 ~ 41514350 (+)
G978758 NA non-coding upstream 5540 41510531 ~ 41511082 (+)
G978757 NA non-coding upstream 6905 41509516 ~ 41509717 (+)
G978756 NA non-coding upstream 7618 41508799 ~ 41509004 (+)
G978755 NA non-coding upstream 8030 41508310 ~ 41508592 (+)
G978762 NA non-coding downstream 1910 41519131 ~ 41519330 (+)
G978763 NA non-coding downstream 2276 41519497 ~ 41519700 (+)
G978765 NA non-coding downstream 3374 41520595 ~ 41520796 (+)
G979193 NA non-coding downstream 25897 41543118 ~ 41543445 (+)
G979196 NA non-coding downstream 29395 41546616 ~ 41546883 (+)
G978396 NA other upstream 500534 41003076 ~ 41016088 (+)
G978255 NA other upstream 748393 40767836 ~ 40768229 (+)
G976017 NA other upstream 2458611 39057676 ~ 39058011 (+)
G974184 NA other upstream 3453522 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3473292 37866715 ~ 38045713 (+)
G979689 NA other downstream 561271 42078492 ~ 42078855 (+)
G979965 NA other downstream 1011299 42528520 ~ 42533308 (+)
G980019 NA other downstream 1114603 42631824 ~ 42636709 (+)
G981690 NA other downstream 2143153 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2763704 44280925 ~ 44285969 (+)

Expression


Co-expression Network