G978762


Basic Information

Item Value
gene id G978762
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41519131 ~ 41519330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114482
CCTAAATATTTGACCAAGTGGTCAAAAATTtcaatttcaaaaaaactttttttgATCCTTCTGAAACTTTAGGACTATGTCAAGCAACAagttgttgacaaaaaaaaaacatctgaaaaaaataaatatggaGCCATCCCAGATTTGCCAAGCCCCCCAGATCTGTTCAAAACACGAAAAACGTACACAAATGCATatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114482 True 200 lncRNA 0.33 1 41519131 41519330

Neighbor

gene id symbol gene type direction distance location
mblac2 mblac2 coding upstream 330508 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 342995 41172134 ~ 41176136 (+)
LOC118937444 NA coding upstream 575893 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 597705 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 642912 40845782 ~ 40876219 (+)
LOC110535023 nol6 coding downstream 46862 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 62397 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 76206 41595536 ~ 41604715 (+)
LOC118937352 NA coding downstream 106947 41626277 ~ 41632041 (+)
LOC118937445 NA coding downstream 150466 41669796 ~ 41699250 (+)
G978760 NA non-coding upstream 1910 41516622 ~ 41517221 (+)
G978761 NA non-coding upstream 4781 41513939 ~ 41514350 (+)
G978758 NA non-coding upstream 8049 41510531 ~ 41511082 (+)
G978757 NA non-coding upstream 9414 41509516 ~ 41509717 (+)
G978756 NA non-coding upstream 10127 41508799 ~ 41509004 (+)
G978763 NA non-coding downstream 167 41519497 ~ 41519700 (+)
G978765 NA non-coding downstream 1265 41520595 ~ 41520796 (+)
G979193 NA non-coding downstream 23788 41543118 ~ 41543445 (+)
G979196 NA non-coding downstream 27286 41546616 ~ 41546883 (+)
G979198 NA non-coding downstream 42266 41561596 ~ 41562007 (+)
G978396 NA other upstream 503043 41003076 ~ 41016088 (+)
G978255 NA other upstream 750902 40767836 ~ 40768229 (+)
G976017 NA other upstream 2461120 39057676 ~ 39058011 (+)
G974184 NA other upstream 3456031 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3475801 37866715 ~ 38045713 (+)
G979689 NA other downstream 559162 42078492 ~ 42078855 (+)
G979965 NA other downstream 1009190 42528520 ~ 42533308 (+)
G980019 NA other downstream 1112494 42631824 ~ 42636709 (+)
G981690 NA other downstream 2141044 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2761595 44280925 ~ 44285969 (+)

Expression


Co-expression Network