G979200


Basic Information

Item Value
gene id G979200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41564785 ~ 41565193 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114955
tgagaacacgttctcatttacaattgcgacccggccaagataaagcaaagcagtttgacacatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtataaacaagtctatatacgatgtgagcaaatgaggtgagataaaggaggtaaaggcaaaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacactggaatggtagatttgcagtggaagaatgtgcaaagtagaaataaaaataatggggtgcaaaggagcaaaataaataaataaataaataaaataaatacagtagggaaagaggtagttgtttgggctaaaattataggtgggctatgtacaggtgcagtaatctgtgagctgctctgacagttggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114955 True 409 lncRNA 0.36 1 41564785 41565193

Neighbor

gene id symbol gene type direction distance location
mblac2 mblac2 coding upstream 376162 41185100 ~ 41188623 (+)
lysmd3 LOC106580159 coding upstream 388649 41172134 ~ 41176136 (+)
LOC118937444 NA coding upstream 621547 40942000 ~ 40943238 (+)
arrdc3a LOC106580165 coding upstream 643359 40913124 ~ 40921426 (+)
LOC110535697 LOC106580168 coding upstream 688566 40845782 ~ 40876219 (+)
LOC110535023 nol6 coding downstream 999 41566192 ~ 41567177 (+)
LOC118936418 NA coding downstream 16534 41581727 ~ 41585824 (+)
LOC110535708 LOC106580153 coding downstream 30343 41595536 ~ 41604715 (+)
LOC118937352 NA coding downstream 61084 41626277 ~ 41632041 (+)
LOC118937445 NA coding downstream 104603 41669796 ~ 41699250 (+)
G979198 NA non-coding upstream 2778 41561596 ~ 41562007 (+)
G979196 NA non-coding upstream 17902 41546616 ~ 41546883 (+)
G979193 NA non-coding upstream 21340 41543118 ~ 41543445 (+)
G978765 NA non-coding upstream 43989 41520595 ~ 41520796 (+)
G978763 NA non-coding upstream 45085 41519497 ~ 41519700 (+)
G979204 NA non-coding downstream 5628 41570821 ~ 41577062 (+)
G979235 NA non-coding downstream 68044 41633237 ~ 41633469 (+)
G979247 NA non-coding downstream 83827 41649020 ~ 41702046 (+)
G979282 NA non-coding downstream 151555 41716748 ~ 41751955 (+)
G979460 NA non-coding downstream 244329 41809522 ~ 41809776 (+)
G978396 NA other upstream 548697 41003076 ~ 41016088 (+)
G978255 NA other upstream 796556 40767836 ~ 40768229 (+)
G976017 NA other upstream 2506774 39057676 ~ 39058011 (+)
G974184 NA other upstream 3501685 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3521455 37866715 ~ 38045713 (+)
G979689 NA other downstream 513299 42078492 ~ 42078855 (+)
G979965 NA other downstream 963327 42528520 ~ 42533308 (+)
G980019 NA other downstream 1066631 42631824 ~ 42636709 (+)
G981690 NA other downstream 2095181 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2715732 44280925 ~ 44285969 (+)

Expression


Co-expression Network