G979235


Basic Information

Item Value
gene id G979235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41633237 ~ 41633469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1114991
tgtttcatgagctgaaataaaagatcccagtaatgttccatatgcacaaaaaccttatttatctcaaatgttgtgcacaaatttgtttacatccctgttagtgagcatttatcctttgccaagataatccatccacgtgTGCCATATCAAGacgatgattaaacagcatgatcattacacagctgcaccttgtgctggggacaatacaaggccactctaaaaggcacagtcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1114991 True 233 lncRNA 0.39 1 41633237 41633469

Neighbor

gene id symbol gene type direction distance location
LOC118937352 NA coding upstream 1196 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 28522 41595536 ~ 41604715 (+)
LOC118936418 NA coding upstream 47413 41581727 ~ 41585824 (+)
LOC110535023 nol6 coding upstream 66060 41566192 ~ 41567177 (+)
mblac2 mblac2 coding upstream 444614 41185100 ~ 41188623 (+)
LOC118937445 NA coding downstream 36327 41669796 ~ 41699250 (+)
LOC118937354 NA coding downstream 81661 41715130 ~ 41760853 (+)
LOC110535709 LOC106580150 coding downstream 512531 42146000 ~ 42157026 (+)
slf1 slf1 coding downstream 958539 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 1206079 42839548 ~ 42861443 (+)
G979204 NA non-coding upstream 56175 41570821 ~ 41577062 (+)
G979200 NA non-coding upstream 68044 41564785 ~ 41565193 (+)
G979198 NA non-coding upstream 71230 41561596 ~ 41562007 (+)
G979196 NA non-coding upstream 86354 41546616 ~ 41546883 (+)
G979193 NA non-coding upstream 89792 41543118 ~ 41543445 (+)
G979247 NA non-coding downstream 15551 41649020 ~ 41702046 (+)
G979282 NA non-coding downstream 83279 41716748 ~ 41751955 (+)
G979460 NA non-coding downstream 176053 41809522 ~ 41809776 (+)
G979541 NA non-coding downstream 296210 41929679 ~ 41933856 (+)
G979544 NA non-coding downstream 307197 41940666 ~ 41969077 (+)
G978396 NA other upstream 617149 41003076 ~ 41016088 (+)
G978255 NA other upstream 865008 40767836 ~ 40768229 (+)
G976017 NA other upstream 2575226 39057676 ~ 39058011 (+)
G974184 NA other upstream 3570137 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3589907 37866715 ~ 38045713 (+)
G979689 NA other downstream 445023 42078492 ~ 42078855 (+)
G979965 NA other downstream 895051 42528520 ~ 42533308 (+)
G980019 NA other downstream 998355 42631824 ~ 42636709 (+)
G981690 NA other downstream 2026905 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2647456 44280925 ~ 44285969 (+)

Expression


Co-expression Network