G979541


Basic Information

Item Value
gene id G979541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 41929679 ~ 41933856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1115308
ccctctatggggagagagaggggttactagtccctctgtaggggagaaagggggttctagtccctctgtaggggagagagaggggttactagtccctctgtaggggagaaggGGGGTTataagtccctctgtaggggagagagaggggttactagtccatctatggggagaaagaggagttAATAGTCCCTCTGTaggggagaaagggggttcaagtccctctgtaggggag

Function

NR:

description
PREDICTED: serine/arginine repetitive matrix protein 2-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1115308 True 232 lncRNA 0.55 2 41929679 41933856

Neighbor

gene id symbol gene type direction distance location
LOC118937354 NA coding upstream 168826 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 230429 41669796 ~ 41699250 (+)
LOC118937352 NA coding upstream 297638 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 324964 41595536 ~ 41604715 (+)
LOC118936418 NA coding upstream 343855 41581727 ~ 41585824 (+)
LOC110535709 LOC106580150 coding downstream 212144 42146000 ~ 42157026 (+)
slf1 slf1 coding downstream 658152 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 905692 42839548 ~ 42861443 (+)
LOC110535025 LOC106580143 coding downstream 1223776 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 2096682 44030538 ~ 44054846 (+)
G979460 NA non-coding upstream 119903 41809522 ~ 41809776 (+)
G979282 NA non-coding upstream 177724 41716748 ~ 41751955 (+)
G979247 NA non-coding upstream 227633 41649020 ~ 41702046 (+)
G979235 NA non-coding upstream 296210 41633237 ~ 41633469 (+)
G979204 NA non-coding upstream 352617 41570821 ~ 41577062 (+)
G979544 NA non-coding downstream 6810 41940666 ~ 41969077 (+)
G979620 NA non-coding downstream 80671 42014527 ~ 42014753 (+)
G979623 NA non-coding downstream 88829 42022685 ~ 42022911 (+)
G979661 NA non-coding downstream 120417 42054273 ~ 42054494 (+)
G979664 NA non-coding downstream 121313 42055169 ~ 42055469 (+)
G978396 NA other upstream 913591 41003076 ~ 41016088 (+)
G978255 NA other upstream 1161450 40767836 ~ 40768229 (+)
G976017 NA other upstream 2871668 39057676 ~ 39058011 (+)
G974184 NA other upstream 3866579 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 3886349 37866715 ~ 38045713 (+)
G979689 NA other downstream 144636 42078492 ~ 42078855 (+)
G979965 NA other downstream 594664 42528520 ~ 42533308 (+)
G980019 NA other downstream 697968 42631824 ~ 42636709 (+)
G981690 NA other downstream 1726518 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2347069 44280925 ~ 44285969 (+)

Expression


Co-expression Network