G979675


Basic Information

Item Value
gene id G979675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 42065264 ~ 42065592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1115454
Aaaatcagcttctatctcaaggccatcagactgttaaacagccaccactaacattgagtggctgctgccaacatactgactcaactccagccactttaataatggaaaaatgtatcactagccactttaaacaatgccacttaatataatgtttacataccctacattactcatctcaaacatatactgtatactgtactctgtaccatctactgcatcttgtcatctttatgtaatacatgtatcactagccactttaaacaatgccacttttatatgtttacataccctacattactcatctcatatgtatatactgtattctatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1115454 True 329 lncRNA 0.35 1 42065264 42065592

Neighbor

gene id symbol gene type direction distance location
LOC118937354 NA coding upstream 304411 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 366014 41669796 ~ 41699250 (+)
LOC118937352 NA coding upstream 433223 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 460549 41595536 ~ 41604715 (+)
LOC118936418 NA coding upstream 479440 41581727 ~ 41585824 (+)
LOC110535709 LOC106580150 coding downstream 80408 42146000 ~ 42157026 (+)
slf1 slf1 coding downstream 526416 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 773956 42839548 ~ 42861443 (+)
LOC110535025 LOC106580143 coding downstream 1092040 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 1964946 44030538 ~ 44054846 (+)
G979667 NA non-coding upstream 3981 42060152 ~ 42061283 (+)
G979664 NA non-coding upstream 9795 42055169 ~ 42055469 (+)
G979661 NA non-coding upstream 10770 42054273 ~ 42054494 (+)
G979623 NA non-coding upstream 42353 42022685 ~ 42022911 (+)
G979620 NA non-coding upstream 50511 42014527 ~ 42014753 (+)
G979684 NA non-coding downstream 6275 42071867 ~ 42072359 (+)
G979694 NA non-coding downstream 19142 42084734 ~ 42085076 (+)
G979696 NA non-coding downstream 27742 42093334 ~ 42093546 (+)
G979699 NA non-coding downstream 37668 42103260 ~ 42103503 (+)
G979706 NA non-coding downstream 56901 42122493 ~ 42122692 (+)
G978396 NA other upstream 1049176 41003076 ~ 41016088 (+)
G978255 NA other upstream 1297035 40767836 ~ 40768229 (+)
G976017 NA other upstream 3007253 39057676 ~ 39058011 (+)
G974184 NA other upstream 4002164 38057798 ~ 38063100 (+)
LOC110535015 LOC106578726 other upstream 4021934 37866715 ~ 38045713 (+)
G979689 NA other downstream 12900 42078492 ~ 42078855 (+)
G979965 NA other downstream 462928 42528520 ~ 42533308 (+)
G980019 NA other downstream 566232 42631824 ~ 42636709 (+)
G981690 NA other downstream 1594782 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2215333 44280925 ~ 44285969 (+)

Expression


Co-expression Network