G979706


Basic Information

Item Value
gene id G979706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 42122493 ~ 42122692 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1115485
ctgaaggcctataggtttgcCACTGTACTAACATGTCACACACCGAAGGCATATAggttcaccactatactaacctgtGATACACTGAAGACCTaaaggttcaccactgtactaacctgtgaCACACCGAAGGcatataggttcaccactgtactaacctgtgaCACAccgaaggcctataggttcaccactgtactaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1115485 True 200 lncRNA 0.46 1 42122493 42122692

Neighbor

gene id symbol gene type direction distance location
LOC118937354 NA coding upstream 361640 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 423243 41669796 ~ 41699250 (+)
LOC118937352 NA coding upstream 490452 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 517778 41595536 ~ 41604715 (+)
LOC118936418 NA coding upstream 536669 41581727 ~ 41585824 (+)
LOC110535709 LOC106580150 coding downstream 23308 42146000 ~ 42157026 (+)
slf1 slf1 coding downstream 469316 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 716856 42839548 ~ 42861443 (+)
LOC110535025 LOC106580143 coding downstream 1034940 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 1907846 44030538 ~ 44054846 (+)
G979699 NA non-coding upstream 18990 42103260 ~ 42103503 (+)
G979696 NA non-coding upstream 28947 42093334 ~ 42093546 (+)
G979694 NA non-coding upstream 37417 42084734 ~ 42085076 (+)
G979684 NA non-coding upstream 50134 42071867 ~ 42072359 (+)
G979675 NA non-coding upstream 56901 42065264 ~ 42065592 (+)
G979707 NA non-coding downstream 891 42123583 ~ 42124415 (+)
G979984 NA non-coding downstream 443125 42565817 ~ 42566242 (+)
G979985 NA non-coding downstream 443553 42566245 ~ 42566462 (+)
G979987 NA non-coding downstream 446410 42569102 ~ 42569354 (+)
G980019 NA non-coding downstream 511464 42631824 ~ 42636709 (+)
G979689 NA other upstream 43638 42078492 ~ 42078855 (+)
G978396 NA other upstream 1106405 41003076 ~ 41016088 (+)
G978255 NA other upstream 1354264 40767836 ~ 40768229 (+)
G976017 NA other upstream 3064482 39057676 ~ 39058011 (+)
G974184 NA other upstream 4059393 38057798 ~ 38063100 (+)
G979965 NA other downstream 405828 42528520 ~ 42533308 (+)
G981690 NA other downstream 1537682 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 2158233 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 3260715 45189846 ~ 45413082 (+)

Expression


Co-expression Network