G980514


Basic Information

Item Value
gene id G980514
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 42473810 ~ 42563730 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1116375
cgtggtcagcttttccgaaaggggggcggggcagggccttatatgcgtcgcggaagttagagtaacaatgatccaaggtctttccacccctggttgcgcaatcgatatgctgataaaatttagggagtcttgttttcagattagccttgttaaaatccccagctacaatgaatgcagcctccggatgaatggtttccagtttgcaaagagttaaataaagtttgttcagagccatcgctgtgattataatcgaagagaattctcttactagataatgcggtctacatttgattgtgaggaattctaaatcaggtgaacagaagatttgagttcctgtatgtttctttcatcacaccatgtcgcgttagtcataaggcatacgcccccgcccctcttcttaccagaaagatgtttgtttctgtcagcgcgatgtgtggagaaacccgttggctgcaccgcttcggatagagtctctccagtgagccacgtttccgtgaagcaaagaacgttacagtctctgatgtccctctggaatgctacccttgctcggatttcatcaaccttgttgtcaagagactggacattggcaagaagaatgctagggagtggtgcacggtgtgcccgtctccggagtctgaccagaagaccgcctcgtttccctctttttcggagttgtttttttttggggtcgctgcatggaatccactccgttgtcctgtttgtaaggcagaacacaggatccgcgtcgcgaaaaacatattcttggtagtactgatggtgagttgatgctgatcttatattcagtagttcttctcgactgtatgtaatgaaacctaagatgacctggggtactaatgtaagaaataacacgtaaaaaaacaaaaaactgcatagtttcctaggaacgcgaagcgaggcggccatctctgtcggcgccggaagttagaGGGACACTGattaataacatctgcatagtaaatagtaacttacttattattagtattactgcctgtactctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1116375 True 1020 TUCP 0.45 2 42473810 42563730
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110535712 LOC106580148 coding downstream 48495 42179385 ~ 42425315 (-)
LOC110535710 NA coding downstream 324514 42139401 ~ 42149296 (-)
LOC118937353 NA coding downstream 758785 41712605 ~ 41715025 (-)
LOC110535706 LOC106580155 coding downstream 952723 41423356 ~ 41521087 (-)
LOC110535705 LOC106580156 coding downstream 1078588 41330856 ~ 41395222 (-)
LOC110535714 LOC106580145 coding upstream 68092 42631822 ~ 42836577 (-)
LOC110535024 NA coding upstream 345560 42909290 ~ 42916107 (-)
LOC118937355 LOC106580271 coding upstream 359444 42923174 ~ 42925634 (-)
LOC110535716 LOC106580271 coding upstream 374414 42938144 ~ 42958341 (-)
LOC110535717 LOC106580142 coding upstream 663148 43226878 ~ 43242918 (-)
G980461 NA non-coding downstream 82594 42353403 ~ 42391216 (-)
G980437 NA non-coding downstream 154927 42295847 ~ 42318883 (-)
G980439 NA non-coding downstream 171763 42296963 ~ 42302047 (-)
G980359 NA non-coding downstream 311545 42162042 ~ 42162265 (-)
G980312 LOC106580150 non-coding downstream 321339 42149446 ~ 42152471 (-)
G980566 NA non-coding upstream 325 42564055 ~ 42564361 (-)
G980568 NA non-coding upstream 3186 42566916 ~ 42567271 (-)
G980569 NA non-coding upstream 3583 42567313 ~ 42567540 (-)
G980570 NA non-coding upstream 4137 42567867 ~ 42568131 (-)
G980571 NA non-coding upstream 4595 42568325 ~ 42568557 (-)
G979041 NA other downstream 1200383 41273089 ~ 41273427 (-)
G975110 NA other downstream 4395283 38077851 ~ 38078527 (-)
G975103 LOC106578726 other downstream 4428899 38041406 ~ 38045662 (-)
LOC110535661 LOC106578659 other downstream 4728384 37735411 ~ 37809752 (-)
G974756 NA other downstream 5058175 37414378 ~ 37415635 (-)
kiaa0825 kiaa0825 other upstream 9531 42425475 ~ 42591782 (-)
G982818 LOC106613263 other upstream 2045679 44609409 ~ 44609942 (-)
G983486 NA other upstream 2535758 45099488 ~ 45100219 (-)
G984166 LOC106580127 other upstream 3041994 45605724 ~ 45606417 (-)

Expression

G980514 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
End of interactive chart.

G980514 Expression in each Bioproject

Bar chart with 20 bars.
G980514 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
End of interactive chart.

Co-expression Network