G979965


Basic Information

Item Value
gene id G979965
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 42528520 ~ 42533308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1115777
ATTTCTTCACGGGAGCCAAATCTGTCATCACCGTTCTAAGTTAGATGGACAGCATTCCTAAGTGTGTCTTAGTGTAATCATGTGAGGGTTGTGAGTTGGagcagagatagacagaggaaccctacacttcctctctctctttgggaGGCCTGTATGTAACACagtgcaagcacacacacgcacacgcacacgcacacgcacacacacacacacacacaagccctcTCTCCCAACACTAATTCATGGACGACCTGCACATTGTCATCCGTCAGCGGTGATGTGAAGCAGTTGTGGACTGAAGGCCTCAGCATGTGTTCAGGGTGTGTTTAGTATGTGTTAATGCAGTGTTCAGTCCCCCACGTCAAGCCCAAGAGGAACACTATGGAACTGAGCCTAACCCTAACACGACAACACTAACAACAACAATACTAACAACACgatcaacaccaacaacaacactaaCACCAACAATACTAACAACACgatcaacaccaacaacaacactaaCAACATGATCAACACCAATAACACCAACAgcacaaacaacaacactaacAAAACTAACAACACGATCAACACCAATAACACCAACAgcacaaacaacaacactaacAATACTAACAACACGATCAACACCAATAACACCAacagcacagacaacaacactaaCAACACTAACAATACTAACAACATGATCAACACCAACAACACAAAATACACaaacaataataacaacacaaAACCGACCAACAATACTAACAACACTAACAATACCAACAACACCAACAGCACAAACAATActaacaacacaaacaacactaACAATACTAACAGCACTAACAATactaacaacaataacaatactAGCAACACTAACAATActaacaacacaaacaacaccaaCAATActaacaacacaaacaacactaACAATACTAACATCACTAACAATACtaacaacacaaccaacactaACAATACTAACAGCACTAACAATACTAACAACACAAACTACAAACAACACTaacaatactaaccctactaacacCACTATCAACACTAACAACAACACTAACAATTCTAACAAAACTAACACTACTAACACCACTAACAATACTAACAATACTAGCACTactaacaataataacaacactAACACTACAAACAACACTAACAATACTAACACGACTAACACCACTAACACTACTAACCATACTAACACTATTAACAATACTAACACCACTAACAACACTACCCATACTAACACCACTAACGATACTAACACCACTAACAATACTAACACCACTAACAGCACTACCAATACTAACACCACTAACAATACTAACACTACTAACAATAATAACACCACTAACAGCACTACCAATACTAACACCACTAACACTACCAACAACACTAACAATACTAACATGACTAACAATACTAACAACACTAACACTACAACCAACACTAACAATATCACTACTACTAACAACACTGACCAAACTAACAATACTAACAACACTAACACCACTAACAACACTAACACTAATAACAATGCTAACACTACTAACAATGCTAACAATGTTAACACTACTAACAATGCTAACACTCCTAACAACACTAACCACACTAACAATACTACTCGCACTAACAATACTAGCACTACTAACAACACTGACAACCCTACCAATACTAACAACACTACCAATgctaacactactaacactactaacaccACAAACCATACTAACACTACTAACAATACTAACAACACTATCAATACTAACAACACTAACGCTACAAACAACACTAACACTCCTAACACTACTATCAACACCAATAACACTAACAATACTAACAACACTAACAACACTAACACTACTAACAATGCTAACACTACTAACAATGCTAACACTACTAACAACACTAACCACACTAACAATACTACTCGCACTAACAATACTAGCACTACTAACAACACTGACAAAACTACCAATACTAACAAAACTACCAATgctaacactactaacactactaacaccACAAACCATACTAACACTACTAACAATACTAACAACACTACCAATACTAACACCACTAACAATACTAACAACACTACCAATACTAACACCACTAACAATACAACACTACCAAAACTAACAACACTACCAATGTTAACACTACTAACACCACTAACAATACTAACACTATTAACAATACTAACACCACTAACAACACTACCAATACTAACACCACTAACGATACTAACACCACTAACAATACTAACACCACTAACAGCACTACCAATACTAACACCACTAACAATACTAACGCTACTAACAATACTAACACCACTACCAATACTAACACCACTAACAATACTAACACTATTAACACCACTAACACTACCAACAACACTAACAATACTAACACGCCTAACAATACTAACAACACTAACACTACAACCAACACTAACAATATCACTACTACTAACAACACTGACAACACTAACAATACTAACAAAACGAACACCACTAACAACACTAACACTAATAACACTACTAACAATACCGACAACACTAACACTACAAACAACACTAACAAAACTAACACTACTAACACCACTAACACTACTAACACCACTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1115777 True 2648 TUCP 0.37 2 42528520 42533308

Neighbor

gene id symbol gene type direction distance location
LOC110535709 LOC106580150 coding upstream 371494 42146000 ~ 42157026 (+)
LOC118937354 NA coding upstream 767667 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 829270 41669796 ~ 41699250 (+)
LOC118937352 NA coding upstream 896479 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 923805 41595536 ~ 41604715 (+)
slf1 slf1 coding downstream 58700 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 306240 42839548 ~ 42861443 (+)
LOC110535025 LOC106580143 coding downstream 624324 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 1497230 44030538 ~ 44054846 (+)
LOC110535722 LOC106580138 coding downstream 1586173 44119481 ~ 44178070 (+)
G979707 NA non-coding upstream 404105 42123583 ~ 42124415 (+)
G979706 NA non-coding upstream 405828 42122493 ~ 42122692 (+)
G979699 NA non-coding upstream 425017 42103260 ~ 42103503 (+)
G979696 NA non-coding upstream 434974 42093334 ~ 42093546 (+)
G979694 NA non-coding upstream 443444 42084734 ~ 42085076 (+)
G979984 NA non-coding downstream 32509 42565817 ~ 42566242 (+)
G979985 NA non-coding downstream 32937 42566245 ~ 42566462 (+)
G979987 NA non-coding downstream 35794 42569102 ~ 42569354 (+)
G980019 NA non-coding downstream 100848 42631824 ~ 42636709 (+)
G980072 NA non-coding downstream 170260 42703568 ~ 42703849 (+)
G979689 NA other upstream 449665 42078492 ~ 42078855 (+)
G978396 NA other upstream 1512432 41003076 ~ 41016088 (+)
G978255 NA other upstream 1760291 40767836 ~ 40768229 (+)
G976017 NA other upstream 3470509 39057676 ~ 39058011 (+)
G974184 NA other upstream 4465420 38057798 ~ 38063100 (+)
G981690 NA other downstream 1127066 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 1747617 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 2850099 45189846 ~ 45413082 (+)
G984422 pesc other downstream 3574612 46107920 ~ 46109940 (+)

Expression


Co-expression Network