G979985


Basic Information

Item Value
gene id G979985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 42566245 ~ 42566462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1115797
GCAatcacatatttggctgcaagaggagccattgctccttcgcccattactattttttgtttttcctctgggtttaatATGTTAAAATTTGGAATAAATGTAGTCATGTCTGTGAATACTTAATCTCTTGGTGAGGAATATttctcacagtaaaggagaaagtgcatctctgtttcTACCTCCCCTGTCGTGCAGTGatcacaaactctctctctctc

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1115797 True 218 lncRNA 0.39 1 42566245 42566462

Neighbor

gene id symbol gene type direction distance location
LOC110535709 LOC106580150 coding upstream 409219 42146000 ~ 42157026 (+)
LOC118937354 NA coding upstream 805392 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 866995 41669796 ~ 41699250 (+)
LOC118937352 NA coding upstream 934204 41626277 ~ 41632041 (+)
LOC110535708 LOC106580153 coding upstream 961530 41595536 ~ 41604715 (+)
slf1 slf1 coding downstream 25546 42592008 ~ 42629731 (+)
fam81b fam81b coding downstream 273086 42839548 ~ 42861443 (+)
LOC110535025 LOC106580143 coding downstream 591170 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 1464076 44030538 ~ 44054846 (+)
LOC110535722 LOC106580138 coding downstream 1553019 44119481 ~ 44178070 (+)
G979984 NA non-coding upstream 3 42565817 ~ 42566242 (+)
G979707 NA non-coding upstream 441830 42123583 ~ 42124415 (+)
G979706 NA non-coding upstream 443553 42122493 ~ 42122692 (+)
G979699 NA non-coding upstream 462742 42103260 ~ 42103503 (+)
G979696 NA non-coding upstream 472699 42093334 ~ 42093546 (+)
G979987 NA non-coding downstream 2640 42569102 ~ 42569354 (+)
G980019 NA non-coding downstream 67694 42631824 ~ 42636709 (+)
G980072 NA non-coding downstream 137106 42703568 ~ 42703849 (+)
G980171 NA non-coding downstream 299673 42866135 ~ 42866460 (+)
G980175 NA non-coding downstream 304335 42870797 ~ 42871073 (+)
G979965 NA other upstream 32937 42528520 ~ 42533308 (+)
G979689 NA other upstream 487390 42078492 ~ 42078855 (+)
G978396 NA other upstream 1550157 41003076 ~ 41016088 (+)
G978255 NA other upstream 1798016 40767836 ~ 40768229 (+)
G976017 NA other upstream 3508234 39057676 ~ 39058011 (+)
G981690 NA other downstream 1093912 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 1714463 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 2816945 45189846 ~ 45413082 (+)
G984422 pesc other downstream 3541458 46107920 ~ 46109940 (+)

Expression


Co-expression Network