G980209


Basic Information

Item Value
gene id G980209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 42919306 ~ 43029136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1116055
AATTAAAACAGCTTACTGCTACAatcactttcttttttttctttttttatattttacccctctttctccccaatttcgtggtatccaagatagtagctactatcttgtctcattgctacaactcccgtacgggctcgggagagacgaaggttgaatgtcatgtgtcctccgatacacaacccaaccagccgtACTGcctcttaacacagcgcgcatccaacccgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1116055 True 225 lncRNA 0.44 2 42919306 43029136

Neighbor

gene id symbol gene type direction distance location
fam81b fam81b coding upstream 57863 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 289575 42592008 ~ 42629731 (+)
LOC110535709 LOC106580150 coding upstream 762280 42146000 ~ 42157026 (+)
LOC118937354 NA coding upstream 1158453 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 1220056 41669796 ~ 41699250 (+)
LOC110535025 LOC106580143 coding downstream 128496 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 1001402 44030538 ~ 44054846 (+)
LOC110535722 LOC106580138 coding downstream 1090345 44119481 ~ 44178070 (+)
LOC110535730 LOC106580238 coding downstream 1825366 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 1860593 44889729 ~ 44895936 (+)
G980194 NA non-coding upstream 29873 42889224 ~ 42889433 (+)
G980191 NA non-coding upstream 30818 42888288 ~ 42888488 (+)
G980175 NA non-coding upstream 48233 42870797 ~ 42871073 (+)
G980171 NA non-coding upstream 52846 42866135 ~ 42866460 (+)
G980072 NA non-coding upstream 215457 42703568 ~ 42703849 (+)
G980891 NA non-coding downstream 30713 43059849 ~ 43060183 (+)
G980920 NA non-coding downstream 50430 43079566 ~ 43079842 (+)
G980953 NA non-coding downstream 76733 43105869 ~ 43106192 (+)
G980977 NA non-coding downstream 97364 43126500 ~ 43127182 (+)
G980980 NA non-coding downstream 98982 43128118 ~ 43128364 (+)
G980019 NA other upstream 282597 42631824 ~ 42636709 (+)
G979965 NA other upstream 385998 42528520 ~ 42533308 (+)
G979689 NA other upstream 840451 42078492 ~ 42078855 (+)
G978396 NA other upstream 1903218 41003076 ~ 41016088 (+)
G978255 NA other upstream 2151077 40767836 ~ 40768229 (+)
G981690 NA other downstream 631238 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 1251789 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 2354271 45189846 ~ 45413082 (+)
G984422 pesc other downstream 3078784 46107920 ~ 46109940 (+)
G985257 NA other downstream 3578256 46607392 ~ 46607681 (+)

Expression


Co-expression Network