G980980


Basic Information

Item Value
gene id G980980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 43128118 ~ 43128364 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1116902
CCAATATGTTGTGCagtcagacttatttgccattccttttgcctcagtCTCTAAATAatttttcttaatgggtgcatgcttattagtaacaaTGTCATAAATGTGCCTCTTGTGGGAAACATTCTTATGTGAATTTAGAGGATAAACTGGTAAGGAGTTCTAGTCTTCATTGGGGATTTTACCATCCTCAATAGGAAAGCTGACCTTATAAAACCAGAGGTTTGTTAACTCTCCCCATGATTGGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1116902 True 247 lncRNA 0.37 1 43128118 43128364

Neighbor

gene id symbol gene type direction distance location
fam81b fam81b coding upstream 266675 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 498387 42592008 ~ 42629731 (+)
LOC110535709 LOC106580150 coding upstream 971092 42146000 ~ 42157026 (+)
LOC118937354 NA coding upstream 1367265 41715130 ~ 41760853 (+)
LOC118937445 NA coding upstream 1428868 41669796 ~ 41699250 (+)
LOC110535025 LOC106580143 coding downstream 29268 43157632 ~ 43208004 (+)
LOC110535720 NA coding downstream 902174 44030538 ~ 44054846 (+)
LOC110535722 LOC106580138 coding downstream 991117 44119481 ~ 44178070 (+)
LOC110535730 LOC106580238 coding downstream 1726138 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 1761365 44889729 ~ 44895936 (+)
G980977 NA non-coding upstream 936 43126500 ~ 43127182 (+)
G980953 NA non-coding upstream 21926 43105869 ~ 43106192 (+)
G980920 NA non-coding upstream 48276 43079566 ~ 43079842 (+)
G980891 NA non-coding upstream 67935 43059849 ~ 43060183 (+)
G980255 NA non-coding upstream 138609 42989149 ~ 42989509 (+)
G981035 LOC106580142 non-coding downstream 100932 43229296 ~ 43234003 (+)
G981657 NA non-coding downstream 513755 43642119 ~ 43642337 (+)
G981802 NA non-coding downstream 622694 43751058 ~ 43751264 (+)
G981882 NA non-coding downstream 698843 43827207 ~ 43827429 (+)
G980019 NA other upstream 491409 42631824 ~ 42636709 (+)
G979965 NA other upstream 594810 42528520 ~ 42533308 (+)
G979689 NA other upstream 1049263 42078492 ~ 42078855 (+)
G978396 NA other upstream 2112030 41003076 ~ 41016088 (+)
G978255 NA other upstream 2359889 40767836 ~ 40768229 (+)
G981690 NA other downstream 532010 43660374 ~ 43715297 (+)
G982236 LOC106580137 other downstream 1152561 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 2255043 45189846 ~ 45413082 (+)
G984422 pesc other downstream 2979556 46107920 ~ 46109940 (+)
G985257 NA other downstream 3479028 46607392 ~ 46607681 (+)

Expression


Co-expression Network