G981802


Basic Information

Item Value
gene id G981802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 43751058 ~ 43751264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1117760
gacaggaacaatcacccacgaaacactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccactccagacagccatagactattctagacaaccccactaaccactatcccataacctacaacaaacccctagacaaaacacaccacataaataacccatgtcacaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1117760 True 207 lncRNA 0.44 1 43751058 43751264

Neighbor

gene id symbol gene type direction distance location
LOC110535025 LOC106580143 coding upstream 543054 43157632 ~ 43208004 (+)
fam81b fam81b coding upstream 889615 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 1121327 42592008 ~ 42629731 (+)
LOC110535709 LOC106580150 coding upstream 1594032 42146000 ~ 42157026 (+)
LOC118937354 NA coding upstream 1990205 41715130 ~ 41760853 (+)
LOC110535720 NA coding downstream 279274 44030538 ~ 44054846 (+)
LOC110535722 LOC106580138 coding downstream 368217 44119481 ~ 44178070 (+)
LOC110535730 LOC106580238 coding downstream 1103238 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 1138465 44889729 ~ 44895936 (+)
LOC110535026 LOC106580237 coding downstream 1148853 44900117 ~ 44910458 (+)
G981657 NA non-coding upstream 108721 43642119 ~ 43642337 (+)
G981035 LOC106580142 non-coding upstream 517055 43229296 ~ 43234003 (+)
G980980 NA non-coding upstream 622694 43128118 ~ 43128364 (+)
G980977 NA non-coding upstream 623876 43126500 ~ 43127182 (+)
G980953 NA non-coding upstream 644866 43105869 ~ 43106192 (+)
G981882 NA non-coding downstream 75943 43827207 ~ 43827429 (+)
G982132 NA non-coding downstream 333331 44084595 ~ 44128157 (+)
G982206 NA non-coding downstream 479985 44231249 ~ 44231472 (+)
G982207 NA non-coding downstream 482165 44233429 ~ 44233662 (+)
G981690 NA other upstream 35761 43660374 ~ 43715297 (+)
G980019 NA other upstream 1114349 42631824 ~ 42636709 (+)
G979965 NA other upstream 1217750 42528520 ~ 42533308 (+)
G979689 NA other upstream 1672203 42078492 ~ 42078855 (+)
G978396 NA other upstream 2734970 41003076 ~ 41016088 (+)
G982236 LOC106580137 other downstream 529661 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 1632143 45189846 ~ 45413082 (+)
G984422 pesc other downstream 2356656 46107920 ~ 46109940 (+)
G985257 NA other downstream 2856128 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 3096439 46847703 ~ 46875441 (+)

Expression


Co-expression Network