XLOC_002878 (bcl7ba)


Basic Information

Item Value
gene id XLOC_002878
gene name bcl7ba
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33240410 ~ 33251876 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005324
AGCCACCTGTGTCCTCTGGAAGTAGGTGGGATCTACTTGTCAAGCTGTGGAAAGTGGAGAGAGTCGTGAGTTCTCGCGAGACGAGATTTGCGCCGCTAGACTGCGAGACCGACACGATTCCAGTAAGAGTACCGATAAAATTAAGAAATGTCGGGTCGTTCGGTCCGCGCGGAGACCCGGAGCCGCGCTAAAGATGACATTAAGAAAGTCATGGCTGCCATCGAGAGAGTACGGAGATGGGAGAAGAAATGGGTCACAGTTGGAGATACATCATTAAGAATATTTAAATGGGTCCCCGTGGTGGACACAAAGGAGaaggaaAAGAGCAAAGTGTCTGTGGGTGGAGAAATGCAGCGGAAGAATTTTCCCTCAGAGGAGTCCTCTGATAATGCCTGCTCTGTGCTATTAGATTTTCAAGATGAAAACAGCAACCAGAGTTCTCTGTCAGACTCATACCAGCATAAAGCAGCTGCAGACAGCAGCAATAACTCCAGTCCACCGGCCAGTGAGCCGGTCAGTCCGGCACCTCAGAGTCTAGACTACAGGACTGATGACCCACAGCCACCCACCCTCGGCCAGGAGATCATGGAAGagccGCTTCTGCAGTCAAGTGAGATTGCAGATGAGCCGCCAACACTGATCAAAGAAGATCTTCTACCCCTCACTGCTCAGGAGGACGAGGACAGCTGTGGAGCTCCACCACTGAAAAGAATCTGCACCGAGCAGGTCTCGGTCATCCAGATGGTCCCTCTGAGctaacacacagacacgcacacacacatactgtacactgggCATTGATAATCAGCCAGACTGATAACTGACCTTCCTAGAACTGCTGCGAAAGACACAACATGGACCAGACGTCTAGAAAgcactatatttattattactatcgTCACATGGGATGGCTTTTTAACCTTTTAGAGTTTTTAAATCTCTGCCTTCCCTGACTCTTATTCCCAGAATACGCTTCCATTCAGGTCATGCTGGAATTATCATTAATTTCAGAAGATCTCATAGCAGAATTTCCTAATTCCGATAATTCCGAAGCAATAAATCAAGGTTTATAGACCGAAACCGAAAGAAGCCAGAATATTAACTGGACATTCCTGTTTACAGGAGAGCGGATGACTGAAAAACGGGAAGCGCTTCTTGCTGAAATTGCTGTTACTGTTATAATGCTGatagtttatataatatatagtggAATGTGATGCTTGTTTTAAAAGAAAGCCATAAAGCGACGTAATTTGGACTGAATGGTTAGCCTTAAAATGtcctctgaaataaagacaagTAGTGAGTTCCATTAAGAAGGGTACTTGAAATATAATGAAATGCACAAATAATCTCATTAGACCACACCATTCCCTTTTAATAAACACGTCTTCACTCGTAGTCTGGGTTTACACACAGGCTGAAATGAATGTTAAAGTTTTAATTCGTAAGATGTGAATAATGTAGTTTGTAGATTCTGCTCTCAGGGTCTCTGGTGCCTCCAGCTGCTCAAGAATCTCTCAttagttttaattaattgaacataatttttttttttctgcctgaaGGACACCCCTAAAGCGCCCATCTTTTAtgccacctattttttttttatttagaccaATTTTGCTAATGTAATGCACACATCGATAGAAGTTGCTGTTTAGTGTGTTGTTGCTTTTCATCAGATTTTATAGTGCGGGTGATTGTTGATTCGTTTTTGCCCTTTATCTTTGCACACTGGTCTAGTGGGCACATTGTGGTTGAAGAAGCAGCAATATTGTCATTTGAAGCAAGTATCATTAAAAATATtagaaatttatttcattaattgttTACATGGTTTATTTTTGACGTATGATTCAAATATTGATGTGAACTATGGTTTACTGCCCCACAATTGTTTTCAACACTAAACCTGTATACTTTGAATTCTATAGGATCATGTCACACTGCTGCTGATAATGTAGCTTTGAATTCACAGGAAAATATTATACTTTaaaatacactcatcggccactttatttggtacaccttagtagtggttccatcccaaagagggaaaaaatcactttcgcgaacgctcacgctcaatctgcccagttggtggaataaactccctaactgcatcagaacagcagagtcactcgctattttcatgtcacgactaaaaactcaactatttagtctccacttcacttcctaatctgcaattgcctctttgaatatcacactaactaactgtacaaaaaaaaaaaaaaaaaaaaaaactactaacacttcccttcttagactttacagacctgaaacttgcctttagtacttattcattgttgctcttagttgtgtaaattgcttccttgtcctcatttgtaagtcgctttggataaaagcgtctgctaaatgactaaatgtaaatgtaaatgtagtaccgggttggatccagcttttgcctttagaactgccttaatccttcatggcacagattcatcgaggcactggaaatattcctcagagattttggttcatattgacataatagcgtcacgcagttgctgcagatttgtccgctGCGCATTTATGATGCGAATCCCCTTTCCACCAcctcccaaaggtgctctattggattgagctttggtgactgtgtaggccatttgagtacagtgaactcattgttatgatcaagaaaccagtttgagatgattcacgctttaattatgacatggcacattatcctgctggaagaagatgggtacactggtcataaagagatggacatggtcagcaacaatactcgggtaggatGTGGcactgacacaatgctcaattggtactaaagggcccaaagtgtgccaggaaaatatcccccacaccattacaccaccatcacaagcctgaaccgttgatacaaggcaggatggatccatgctttcatgttgttgaggccaaattctgaccctaccatccaaacagaactgccgctcactgtatatattctctttttcagatcattctctgtaaaccctagagatggttgtgcgtgaaaattccagtagatcagtagtttctgaaatactcagaccagccggtctggtaccaacaaccgtaccatgttcaaagtcacttaaatcccctttcttccccattctgatgctctgtttgaactgcagcagatggtcttgaccatgtctacatgcctaaatgcattgagttgctgccacgttgtttgcattaacaagcagttggacaggtgtacctaataaagtggcctgttagtgtgtatatgtatatgtatatgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacacacacacacacacacacacacacacacacacacacacacaaaatggttatatattactaataataattaagccTAGgtgatattaaaatatatatgggATATTTTAAAACCTCAATCTTTTGGTTTATACGTTCATAAAACCAGAATGAAAAGTtttgtaaggcaaggcaagtttatttatatagcacatttcatacacagtggcaattcaaagtgctttacataaacaggaataaaagagactagtatgagaaaaattaaaaaacaaataataaaaatgataaaaacagataaaatgtgttagtacaggttataaaagaatgaaatggaagagataaacataatagtgcgatctgtgggacatagcacagtgctcattcagtaaaggcacagctaaacagatgtgttttcagtcttgatttgaatgtgcctaatgttggagcacatcggATCATTTCTgtaagctgattccagcagcgagaggcatagtggctgaaggctgattcaccctgctttggctgaactcttggaatttctagtttatatgttcttaaagatctgagtgatctaatAGGTTTgcattcagtgagcatatctgtaatatattgaggttctaggccatttagtgatttatagacgagtaataataatttaaaatctattctgaatgttacTGGgaaccagtgtaaagacctgaggacaggtgtgatgtgctctgatttcctggttatAATATCTGTGGAGTGAAAGGTTGggtaagttatttatttaaattctattTAAATTACTTTCTCTTATTTAATTAGCAATTTAATTACTTAACTGCTTACAATCTCTATAAATCTAAGTGCAAAATAGAAATGTACtcttaattctttaaatttgGCCTTTTAGCTTTAACAAATTGTTATacataatattaaacaataaatgtatcaaaatatgAAACGTTTCAGTGTAATGGCGCAATATTTCATAAATACCATATATTGATCATATACCATATAATTCTTATACCATATAATTATTTCTTAATGCATTCATTTAGTCAGAAAAATCTACCTGTCTTTAGTTAGGAAATCCAGTTACAGTGAAAACTATCTGAGtaagaatgcattttttttctttagctgggtcagttggcatttctgtgtggagtttgcatgttctcctcactGTTTCCCTCACAGACATGCCATAGACTTGCTCTATAGGtgacttgaataaactaaattggccgtatgaatgtgtgtgaatgagtgtgtagggatgtttcccagtactgggtcgcagctggaagggcatccactgtgtaaaacatatgctacataagttggtgattcattccactgtggcgaaccctgatgaaaaaagggaacaagctaaagtgaatgaatgaatgtacaacaTATATTTGTCTAACAATAACATTGATTTACTGtatacagaactgttgaattAATGGACAATATTTAAGGCAAGCGCACGAGTTACTACAATTAAATTACCCAAAAACGCCTTGCTTTACTTTTCCAGCAGAAAATGACAGTAACTAGTCACTTTGCAACTAATTTAACCCAACACGTGTGGTGTGCTATCCAATGTTTGACCGGCAGGTGGCGCTAaagccatttttttttcaaatcagagtaggaattattattttatccctcttcaagattttttaaaattacatttactttacattccatcatgcaaaatatatttgaGTCATTTACACAATACAGTTTTTCTCTTCTCTAGTTGCGTTTTAATACTCCCTGCGTTTGTTTTGGCGTGTGTTACACCGTACCTTTAAATACCTTGACTATTACAAACGCATGGAGGATTTTGGGCCATGCCAACTATGATGTAGTATATACTAGATAGTCATCCAATTAGGTTATGAGACACAAGCAGAGTTGTACCTTAAGAAAATCGGACAGTGTGTTTTACTCTAGTCAGAGATCGTCTCTCCTCACCCGTCAGAAACTCCCTCAACTCCTCCGAGCGGGAAAAACATCAGTTAAAGCAAATCTTTGATCTTTGAAAAGATGCGGGAGGGATTTTTAATACTCCTTTGTGTTTTCTTGTTGGCGCTTCGTCCTTTTAAAGCAACGGCTGTTTATCAGCTTCCAGTGAGGCTGCAGCGCACGGTGTCCGAGCACAACACTGGAGCGAACACTGCGCTCAACAG

Function

symbol description
bcl7ba Orthologous to several human genes including BCL7B (BAF chromatin remodeling complex subunit BCL7B).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2193 Orthologous to several human genes including BCL7B (BAF chromatin remodeling complex subunit BCL7B).

Ensembl:

ensembl_id ENSDARG00000111877

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005324 True 5567 mRNA 0.39 6 33240410 33251876

Neighbor

gene id symbol gene type direction distance location
XLOC_002877 NA coding downstream 75837 33158589 ~ 33164573 (-)
XLOC_002876 cux1a coding downstream 83621 32898533 ~ 33156789 (-)
XLOC_002875 NA coding downstream 343466 32894997 ~ 32896944 (-)
XLOC_002874 kctd7 coding downstream 349793 32881586 ~ 32890617 (-)
XLOC_002873 rabgef1 coding downstream 360112 32854901 ~ 32880298 (-)
XLOC_002879 tbl2 coding upstream 2076 33253952 ~ 33265566 (-)
XLOC_002880 PRDM15 coding upstream 17495 33269371 ~ 33297864 (-)
XLOC_002881 c2cd2 coding upstream 54102 33305978 ~ 33343244 (-)
XLOC_002882 ska2 coding upstream 115479 33367355 ~ 33379850 (-)
XLOC_002883 dre-mir-454a coding upstream 124942 33376818 ~ 33376941 (-)
XLOC_002871 NA non-coding downstream 460120 32779880 ~ 32780290 (-)
XLOC_002870 NA non-coding downstream 562165 32676810 ~ 32678245 (-)
XLOC_002867 NA non-coding downstream 648948 32584685 ~ 32591462 (-)
XLOC_002884 dre-mir-301a non-coding upstream 125125 33377001 ~ 33377086 (-)
XLOC_002885 dre-mir-130a non-coding upstream 125254 33377130 ~ 33377214 (-)
XLOC_002890 NA non-coding upstream 411289 33663165 ~ 33664789 (-)
XLOC_002891 BX569785.1 non-coding upstream 624255 33876131 ~ 33880364 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_16067926_16072192 BCL7BA coding CI01000304 null 16067887 ~ 16072192 (-)