G982207


Basic Information

Item Value
gene id G982207
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 44233429 ~ 44233662 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1118184
TATGCATTATGGTAGAAATGTGTTTTATGGCTATCATGATGGAACATTCTTAGCTGAAGAGAGTTCCTGGAAAGAGTACTTAGGTGCTCATTTGGCTTTTCCCTGAGGGAGAGCAGGCAACAGGTTGGCTAGAGCAGAGTTATACCTGTGCTTTGTTATAGGCAAAGAGTTGTTGCCGGAAAATAATTTATACTGAGAATATGTTTGATTTATTCAAGTCTTTGTCAACGTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1118184 True 234 lncRNA 0.40 1 44233429 44233662

Neighbor

gene id symbol gene type direction distance location
LOC110535722 LOC106580138 coding upstream 55359 44119481 ~ 44178070 (+)
LOC110535720 NA coding upstream 200808 44030538 ~ 44054846 (+)
LOC110535025 LOC106580143 coding upstream 1025425 43157632 ~ 43208004 (+)
fam81b fam81b coding upstream 1371986 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 1603698 42592008 ~ 42629731 (+)
LOC110535730 LOC106580238 coding downstream 620840 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 656067 44889729 ~ 44895936 (+)
LOC110535026 LOC106580237 coding downstream 666455 44900117 ~ 44910458 (+)
LOC110535028 LOC106580235 coding downstream 760307 44993969 ~ 45004309 (+)
LOC110535732 LOC100196865 coding downstream 827576 45058392 ~ 45075192 (+)
G982206 NA non-coding upstream 1957 44231249 ~ 44231472 (+)
G982132 NA non-coding upstream 105272 44084595 ~ 44128157 (+)
G981882 NA non-coding upstream 406000 43827207 ~ 43827429 (+)
G981802 NA non-coding upstream 482165 43751058 ~ 43751264 (+)
G982214 NA non-coding downstream 7131 44240793 ~ 44241004 (+)
G982217 NA non-coding downstream 14857 44248519 ~ 44248785 (+)
G982175 NA non-coding downstream 21527 44255189 ~ 44256841 (+)
G982174 NA non-coding downstream 23622 44257284 ~ 44259040 (+)
G982268 NA non-coding downstream 88065 44321727 ~ 44321950 (+)
G981690 NA other upstream 518132 43660374 ~ 43715297 (+)
G980019 NA other upstream 1596720 42631824 ~ 42636709 (+)
G979965 NA other upstream 1700121 42528520 ~ 42533308 (+)
G979689 NA other upstream 2154574 42078492 ~ 42078855 (+)
G978396 NA other upstream 3217341 41003076 ~ 41016088 (+)
G982236 LOC106580137 other downstream 47263 44280925 ~ 44285969 (+)
LOC110535735 fibcd1 other downstream 1149745 45189846 ~ 45413082 (+)
G984422 pesc other downstream 1874258 46107920 ~ 46109940 (+)
G985257 NA other downstream 2373730 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 2614041 46847703 ~ 46875441 (+)

Expression


Co-expression Network