G982271


Basic Information

Item Value
gene id G982271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 44329012 ~ 44329287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1118250
gaAAGGGGGCTTTGCTCTTCTTGGGTAgcgaatgacttttgcttccctccaggcctgagggcacaccctttctagtaggcttagattgaagatatggcaaataggagtggcaatattgtccgctattatcctcagtaattttttatccaaatcaagtcaaatgttttttgtttcatACATGTGTtaaacagatgttattgcgggtgtagcgaaatgcttgtgtttctagcaaGTAAtctctaacaatacacacaatctaaagtaaaggaatggaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1118250 True 276 lncRNA 0.39 1 44329012 44329287

Neighbor

gene id symbol gene type direction distance location
LOC110535722 LOC106580138 coding upstream 150942 44119481 ~ 44178070 (+)
LOC110535720 NA coding upstream 296391 44030538 ~ 44054846 (+)
LOC110535025 LOC106580143 coding upstream 1121008 43157632 ~ 43208004 (+)
fam81b fam81b coding upstream 1467569 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 1699281 42592008 ~ 42629731 (+)
LOC110535730 LOC106580238 coding downstream 525215 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 560442 44889729 ~ 44895936 (+)
LOC110535026 LOC106580237 coding downstream 570830 44900117 ~ 44910458 (+)
LOC110535028 LOC106580235 coding downstream 664682 44993969 ~ 45004309 (+)
LOC110535732 LOC100196865 coding downstream 731951 45058392 ~ 45075192 (+)
G982268 NA non-coding upstream 7062 44321727 ~ 44321950 (+)
G982174 NA non-coding upstream 69972 44257284 ~ 44259040 (+)
G982175 NA non-coding upstream 72171 44255189 ~ 44256841 (+)
G982217 NA non-coding upstream 80227 44248519 ~ 44248785 (+)
G982214 NA non-coding upstream 88008 44240793 ~ 44241004 (+)
G982280 NA non-coding downstream 16392 44345679 ~ 44346059 (+)
G982309 NA non-coding downstream 87434 44416721 ~ 44435423 (+)
G982301 NA non-coding downstream 90301 44419588 ~ 44421818 (+)
G982302 LOC106580134 non-coding downstream 97002 44426289 ~ 44428926 (+)
G982376 NA non-coding downstream 202197 44531484 ~ 44531704 (+)
G982236 LOC106580137 other upstream 43043 44280925 ~ 44285969 (+)
G981690 NA other upstream 613715 43660374 ~ 43715297 (+)
G980019 NA other upstream 1692303 42631824 ~ 42636709 (+)
G979965 NA other upstream 1795704 42528520 ~ 42533308 (+)
G979689 NA other upstream 2250157 42078492 ~ 42078855 (+)
LOC110535735 fibcd1 other downstream 1054120 45189846 ~ 45413082 (+)
G984422 pesc other downstream 1778633 46107920 ~ 46109940 (+)
G985257 NA other downstream 2278105 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 2518416 46847703 ~ 46875441 (+)
G985401 NA other downstream 2593652 46922939 ~ 46923827 (+)

Expression


Co-expression Network