XLOC_028781 (trhde.2)


Basic Information

Item Value
gene id XLOC_028781
gene name trhde.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 23440404 ~ 23643272 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055775
ATGGGCATCGAGGATACGGGCATGAGGAACGGACGGGCTCTGTCCGATCAGTGGGCCGACAGCGTGGTGGTCCGACCCCGGACTACCGAGCAGCACATCACGGTGCATAAGAGACTGGTGCTGGGCTTCGCCATCTCCATCCTCACCCTCATCATCGTCACGGCCATCGCCATCACGCTCAGCGTCAGCTTCGAGAGATGCGCCGCGGAGAGCAGCGGGTGGAAACAGTCACGGGACGGGAACATCAGTCACAGAGACTCGGAGGACGGCCAGCAGCCCTGGAGACACCTGCGCTTACCGGCCACCCTGCGCCCGCGCCACTACGACCTCCGCCTGACCGTGCACATGGAGAACTTCAGCTTCTCCGGCGAGGTGAACATCGAGTTTGAGTGCGTCAACTCCACCAAGCTGATCGTGTTGCACTCGGACCGGCTGGAGCTAGACAAAGTGCTGGTGTTTTCGGACAGTAAAAAAGCGGGCGCCATGCGGATCCAGCGCCGCTTCCACTATCAGCCCAAACAGGTGTATGTGATCGCGCTGCACAGAGAGATGAAGCCCCTCAGAACATACAAGATCAACATCACCTTCACCGCGCACATCGAGCACGAGCTGCTGGGCTTCTTCCGCAGCTCCTACATGCTCAATGGAGAAAGAAGGTTTCTGGCGGTGACGCAGTTTTCTCCGACTCATGCTAGAAAGGCCTTCCCGTGTTTTGATGAGCCCATCTATAAAGCcacattcagagtgagtctgaaACACGAGAGCTCGTATCAGTCGCTGTCCAACATGCCAGTGGAGGCCACCACATCTGATGAGGATGGATGGGTGACCAACCATTTCTCCAGGACGCCCCGCATGTCCACGTATTACCTGGCCTGGGCCGTTTGTAACTTCACCTACAAAGAAGCAGTCGCAGACAATGGAGTCCTGatTCGGCTGTACGCCAGACCTGATGCCATCCAGAGCGGATCGGGTGACTACGCTCTGCGCATCACCAAGAGACTCCTGCAGTTTTACCAGGATTACTTCAAAGTAAAATATTCCCTCCCCAAATTAGaTCTGCTGGCAGTGCCGAAACATCCGTATGCAGCCATGGAGAACTGGGGCCTCAGTGTGTTTGTGGAGCAGAAGATCTTACTGGATCCTGACGTCTCCTCCTTCTCCTATCAGATGGAGCTCACCATGGTGGTGGTGCACGAGATCTGCCATCAGTGGTTCGGGGATCTGGTCACACCGGTTTGGTGGGAGGACGTTTGGCTGAAAGAGGGATTCGCTCATTACTTTGAGTACATTGGGACTGATTTCCTCTTTCCAAAGTGGAACATGGAGAAGCAGAGGTTTCTGACTGATGTCCTTCATGAGGTGATGTTGCTGGACGGTTTGGCCAGTTCTCACCCAATCTCTCAGCAAGTGTTTGAAGCCACAGACATCGACAGAGTCTTTGACTGGATCGCCTATAAGAAGGGAGCTGCTCTGATCCGAATGCTGGCAAACGTCATGGGACAAACACTATTCCAGAGAGCCCTAAATGATTACTTGATGACGCATATGTACGGGAACGCAGCAAGAGATGACTTGTGGAACAAACTCTCAGAGGCCATGCAGCGGGAGGGAAAGGACATCAACATCACACAGGTTATGGACCGCTGGACTCTACAGATGGGCTATCCGGTGGTCACCATCAGCAAGAACGACAGTCTGGACAACAGCATCACTATTTCCCAAGAGCACTTTGTCTACGACACAGACGCCAAGATTCAGAATCCTGAGCTGTTCAACAAAAGcttccAGTGGCAAATACCACTAACGCTCGCAGTGGGAAACGCCAGTCACATATCAACGGAGACCATCATTTGGGTCACAAATAAATCAGAGGCGCACAGAGTGGGTCACGTGGTTGGTGAGACGTGGTTGCTGGGCAACATCAACCAGACGGGCTACTTTAGAGTGAACTACGACCTTCACAACTGGAAACTTCTTATTCAACAGCTGACGAGAAACCCGACGATCATCTCTGTGGGCAACAGGGCCGGTCTGATTGATGACGTCTTCAACCTGGCGAGAGCTGGATATTTGCCCCAAAACGTCCCCCTGCAGATGATCTCCTATTTGTCTCAGGAGACCGAGTTTCTGCCCTGGCACGCTGCTAGTCGAGCGCTTTACCAGTTGGACAAACTCCTGGACCGCACTTTAGACCACAGCCTGTTCAGCGATTATGTACTAAGACAGGTGGAACCAAAGTATCACAAGCTTGGCTGGCCAGCCACTTCCCCTGACGGCTCCTTGATGCATTCAGCTTATCAGACAGAAGAGCTACAGAGAGAGGTGATCATGCTGGCCTGCAGTTTTGGAAACAAACACTGTCACCGCCAGGCTGTTTCTCTCATTTCTGACTGGATTTCCAGCAACAAGAACAGGATTCCACCCAACGTCCGGGACATTGTGTACTGCACAGGTGTTTCTCTGATGGATGAGGATGTGTGGGAATTTATCTGGATGAAGTTTCACTCGTCTACAGCCGTCTCTGAGAAGAAGGTTCTTTTGGAGGCCTTGACCTGCAGTGACAACATCTTCCTGCTTAACAGGCTCCTGAATCTGTCCCTAACATCAGACCTGGTGCCAGATCAGGATGTAATTGATGTCATCATACATGTGGCCCGCAATCCACTGGGAAGACATTTAGCATGGAGATATTTCAGAGAGAAGTGGGACATATTGAACTCCAGGTATGGAGAAGCTTTATTTATGAACTCAAAATTAATCAGTGGTGTGACAGAGTTTCTCAATACTGAGGCCGAATTGAATGAGCTGAAAGAGTTCATCCTGACCAGCGGAGGAGAGTCAGCGCCTGCGTTCGCTCGAGCCGTCGAGATCGTTCAAGCCAATGTAAAATGGCACATCCTGTTCCAGGAACAGTTTTACCAATGGCTGCGGAAAGCTCCCGATGGATAA
>TCONS_00055777
ATGGGCATCGAGGATACGGGCATGAGGAACGGACGGGCTCTGTCCGATCAGTGGGCCGACAGCGTGGTGGTCCGACCCCGGACTACCGAGCAGCACATCACGGTGCATAAGAGACTGGTGCTGGGCTTCGCCATCTCCATCCTCACCCTCATCATCGTCACGGCCATCGCCATCACGCTCAGCGTCAGCTTCGAGAGATGCGCCGCGGAGAGCAGCGGGGCTCTGGCCGCCAACGGCTCCAGCAACAGTAAGTGGAAACAGTCACGGGACGGGAACATCAGTCACAGAGACTCGGAGGACGGCCAGCAGCCCTGGAGACACCTGCGCTTACCGGCCACCCTGCGCCCGCGCCACTACGACCTCCGCCTGACCGTGCACATGGAGAACTTCAGCTTCTCCGGCGAGGTGAACATCGAGTTTGAGTGCGTCAACTCCACCAAGCTGATCGTGTTGCACTCGGACCGGCTGGAGCTAGACAAAGTGCTGGTGTTTTCGGACAGTAAAAAAGCGGGCGCCATGCGGATCCAGCGCCGCTTCCACTATCAGCCCAAACAGGTGTATGTGATCGCGCTGCACAGAGAGATGAAGCCCCTCAGAACATACAAGATCAACATCACCTTCACCGCGCACATCGAGCACGAGCTGCTGGGCTTCTTCCGCAGCTCCTACATGCTCAATGGAGAAAGAAGGTTTCTGGCGGTGACGCAGTTTTCTCCGACTCATGCTAGAAAGGCCTTCCCGTGTTTTGATGAGCCCATCTATAAAGCcacattcagagtgagtctgaaACACGAGAGCTCGTATCAGTCGCTGTCCAACATGCCAGTGGAGGCCACCACATCTGATGAGGATGGATGGGTGACCAACCATTTCTCCAGGACGCCCCGCATGTCCACGTATTACCTGGCCTGGGCCGTTTGTAACTTCACCTACAAAGAAGCAGTCGCAGACAATGGAGTCCTGatTCGGCTGTACGCCAGACCTGATGCCATCCAGAGCGGATCGGGTGACTACGCTCTGCGCATCACCAAGAGACTCCTGCAGTTTTACCAGGATTACTTCAAAGTAAAATATTCCCTCCCCAAATTAGaTCTGCTGGCAGTGCCGAAACATCCGTATGCAGCCATGGAGAACTGGGGCCTCAGTGTGTTTGTGGAGCAGAAGATCTTACTGGATCCTGACGTCTCCTCCTTCTCCTATCAGATGGAGCTCACCATGGTGGTGGTGCACGAGATCTGCCATCAGTGGTTCGGGGATCTGGTCACACCGGTTTGGTGGGAGGACGTTTGGCTGAAAGAGGGATTCGCTCATTACTTTGAGTACATTGGGACTGATTTCCTCTTTCCAAAGTGGAACATGGAGAAGCAGAGGTTTCTGACTGATGTCCTTCATGAGGTGATGTTGCTGGACGGTTTGGCCAGTTCTCACCCAATCTCTCAGCAAGTGTTTGAAGCCACAGACATCGACAGAGTCTTTGACTGGATCGCCTATAAGAAGGCAAGAGAATCTTTCATAGGCTCCTACAGGCTTTATCTGCATGATGGAAATGactgtaaaccagggGGAGCTGCTCTGATCCGAATGCTGGCAAACGTCATGGGACAAACACTATTCCAGAGAGCCCTAAATGATTACTTGATGACGCATATGTACGGGAACGCAGCAAGAGATGACTTGTGGAACAAACTCTCAGAGGCCATGCAGCGGGAGGGAAAGGACATCAACATCACACAGGTTATGGACCGCTGGACTCTACAGATGGGCTATCCGGTGGTCACCATCAGCAAGAACGACAGTCTGGACAACAGCATCACTATTTCCCAAGAGCACTTTGTCTACGACACAGACGCCAAGATTCAGAATCCTGAGCTGTTCAACAAAAGcttccAGTGGCAAATACCACTAACGCTCGCAGTGGGAAACGCCAGTCACATATCAACGGAGACCATCATTTGGGTCACAAATAAATCAGAGGCGCACAGAGTGGGTCACGTGGTTGGTGAGACGTGGTTGCTGGGCAACATCAACCAGACGGGCTACTTTAGAGTGAACTACGACCTTCACAACTGGAAACTTCTTATTCAACAGCTGACGAGAAACCCGACGATCATCTCTGTGGGCAACAGGGCCGGTCTGATTGATGACGTCTTCAACCTGGCGAGAGCTGGATATTTGCCCCAAAACGTCCCCCTGCAGATGATCTCCTATTTGTCTCAGGAGACCGAGTTTCTGCCCTGGCACGCTGCTAGTCGAGCGCTTTACCAGTTGGACAAACTCCTGGACCGCACTTTAGACCACAGCCTGTTCAGCGATTATGTACTAAGACAGGTGGAACCAAAGTATCACAAGCTTGGCTGGCCAGCCACTTCCCCTGACGGCTCCTTGATGCATTCAGCTTATCAGACAGAAGAGCTACAGAGAGAGGTGATCATGCTGGCCTGCAGTTTTGGAAACAAACACTGTCACCGCCAGGCTGTTTCTCTCATTTCTGACTGGATTTCCAGCAACAAGAACAGGATTCCACCCAACGTCCGGGACATTGTGTACTGCACAGGTGTTTCTCTGATGGATGAGGATGTGTGGGAATTTATCTGGATGAAGTTTCACTCGTCTACAGCCGTCTCTGAGAAGAAGGTTCTTTTGGAGGCCTTGACCTGCAGTGACAACATCTTCCTGCTTAACAG

Function

symbol description
trhde.2 Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Predicted to be involved in several processes, including peptide catabolic process; proteolysis; and regulation of blood pressure. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human TRHDE (thyrotropin releasing hormone degrading enzyme).

GO:

id name namespace
GO:0008217 regulation of blood pressure biological_process
GO:0006508 proteolysis biological_process
GO:0043171 peptide catabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004177 aminopeptidase activity molecular_function
GO:0070006 metalloaminopeptidase activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0042277 peptide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-89 Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Predicted to be involved in several processes, including peptide catabolic process; proteolysis; and regulation of blood pressure. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human TRHDE (thyrotropin releasing hormone degrading enzyme).

Ensembl:

ensembl_id ENSDARG00000111837

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055775 False 2952 mRNA 0.52 20 23440404 23643272
TCONS_00055777 True 2684 mRNA 0.53 16 23455598 23643272

Neighbor

gene id symbol gene type direction distance location
XLOC_028780 CR394543.1 coding downstream 20949 23419320 ~ 23419455 (-)
XLOC_028779 AL929141.1 coding downstream 213555 23226733 ~ 23226849 (-)
XLOC_028778 NA coding downstream 230163 23160015 ~ 23210241 (-)
XLOC_028777 NA coding downstream 314764 23119419 ~ 23125640 (-)
XLOC_028776 magi2a coding downstream 357217 22755465 ~ 23083187 (-)
XLOC_028783 cpm coding upstream 97383 23740655 ~ 23759213 (-)
XLOC_028784 NA coding upstream 125206 23768478 ~ 23873924 (-)
XLOC_028785 celf2 coding upstream 243454 23886726 ~ 24031924 (-)
XLOC_028786 NA coding upstream 610494 24253766 ~ 24376025 (-)
XLOC_028787 NA coding upstream 857857 24501129 ~ 24643509 (-)
XLOC_028768 NA non-coding downstream 1148651 22282725 ~ 22291753 (-)
XLOC_028788 NA non-coding upstream 1082823 24726095 ~ 24790741 (-)
XLOC_028789 NA non-coding upstream 1190254 24833526 ~ 25049007 (-)

Expression


Co-expression Network