G982309


Basic Information

Item Value
gene id G982309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 44416721 ~ 44435423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1118294
CAAAATATGCAAATCCAGTTTACATAGTCTGTCTAGCCGCTGCCAGAGCAATTTCCCCCAACCGGTTCTTGGGAATTTGATTACCGTTTGGAAAGCGAACATTGTCCTGTTTGTTTTTGACAAAGCTCCGATGGTGTGTGAGCGGTGTGCTTTGGAGACATCAAGTGAAGAAACCAAGGGTTCTGCCTGGGAAATCGCCCATGCATAATGAGATGAGCCACTCTGCCATTCTCAGTGCTCCGATGCTGTTGGTTCCAGCGTGCgtattattttttatattgttGCATATGTAAAAGCTGACCGAGGGCCGAATGCTGCATGTTCTGGAGGTGTTGTTGTTGCCAACCGCTCATGGAGCCCAGGTGGAGGGAGCTACCACTGTTAAAGCCGGACAGGGAGGATAGGTCTGCACTGCTCAGCGAGTATTctacacagacatacagagagagagaaggcaaccAGTCAAAACCAGTTCAGGCCAGTTCAACAAGgacctgagccctaggaccatgcctcaggactacctggcatgaggactccttgatgtccccagtccacctggccgtgctgctgctccagtttcaactgttcagcacctgaggtgctgactttctgcaccctcgacaactactttgattattattatttgaccatgctggtcatttatgaacatttgaacatcttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1118294 True 685 lncRNA 0.49 3 44416721 44435423

Neighbor

gene id symbol gene type direction distance location
LOC110535722 LOC106580138 coding upstream 238651 44119481 ~ 44178070 (+)
LOC110535720 NA coding upstream 384100 44030538 ~ 44054846 (+)
LOC110535025 LOC106580143 coding upstream 1208717 43157632 ~ 43208004 (+)
fam81b fam81b coding upstream 1555278 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 1786990 42592008 ~ 42629731 (+)
LOC110535730 LOC106580238 coding downstream 419079 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 454306 44889729 ~ 44895936 (+)
LOC110535026 LOC106580237 coding downstream 464694 44900117 ~ 44910458 (+)
LOC110535028 LOC106580235 coding downstream 558546 44993969 ~ 45004309 (+)
LOC110535732 LOC100196865 coding downstream 625815 45058392 ~ 45075192 (+)
G982280 NA non-coding upstream 70662 44345679 ~ 44346059 (+)
G982271 NA non-coding upstream 87434 44329012 ~ 44329287 (+)
G982268 NA non-coding upstream 94771 44321727 ~ 44321950 (+)
G982174 NA non-coding upstream 157681 44257284 ~ 44259040 (+)
G982175 NA non-coding upstream 159880 44255189 ~ 44256841 (+)
G982376 NA non-coding downstream 96061 44531484 ~ 44531704 (+)
G982380 NA non-coding downstream 100835 44536258 ~ 44536528 (+)
G982381 NA non-coding downstream 102097 44537520 ~ 44537758 (+)
G982395 NA non-coding downstream 122539 44557962 ~ 44558209 (+)
G982762 NA non-coding downstream 135448 44570871 ~ 44571088 (+)
G982236 LOC106580137 other upstream 130752 44280925 ~ 44285969 (+)
G981690 NA other upstream 701424 43660374 ~ 43715297 (+)
G980019 NA other upstream 1780012 42631824 ~ 42636709 (+)
G979965 NA other upstream 1883413 42528520 ~ 42533308 (+)
G979689 NA other upstream 2337866 42078492 ~ 42078855 (+)
LOC110535735 fibcd1 other downstream 947984 45189846 ~ 45413082 (+)
G984422 pesc other downstream 1672497 46107920 ~ 46109940 (+)
G985257 NA other downstream 2171969 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 2412280 46847703 ~ 46875441 (+)
G985401 NA other downstream 2487516 46922939 ~ 46923827 (+)

Expression


Co-expression Network