G982666


Basic Information

Item Value
gene id G982666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 44433144 ~ 44434914 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1118671
atagcccacaaagatctccgccacggcacaacccaaggggggggggcgccaacccagacaggaagatcacatcagtgactcaacccactcaagtgacacacccctcctagggacggcatgaaagagcaccagtaagccagtgactcagcccctgtaatagggttagaggcagagtcTCCCAGTGGTAAGAAGGGAACcggacaggcagagacagcaagggcggttcgttgctccagagcctttccgttcaccttcacactcctgggccagactacactcaatcatatgatccactgaagagatgagtctttagTAAAGACTTAAActttgagaccgagtctgcgtctctcacatggataggcagaccattccataaaaattgagctctataggagaaagccctgcctccagctgtttgcttagaaattctagggacaattaggaggcctgtgtcttatgaacgtagcgtacgtgtaggtatgtacagcaggaccaaatcagagagataggtaggagaaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaaacagcccttgccttaacaggaagccagtgtaggtagcctagcactggagtaatatgataacatgttttggttctagtcaggattctagcagccgtatttagcactaactaaagtttatttagtgctttatccgggtagccggaaagtagagcattgcagtagtctaacctagaagtaacaaaagcatggattaatttttctgcatcatttttggtcagaaagtttctgatttttgcaatgttatgtaaatggaaaaaagctgtccttgaaacagtcttgatatgttcatcaaaagagagatcagggtccagagtaacgccgaggtccttcacagttttatttgagacgactgtacaaccattaagattaattgtcagattcaacagaatatctttttgtttcttgggacctagaacaagcatctctgttttgtccgagtttaaaagtagaaagtttgcagccatccacttccttatgtctgaaacacagacttTTAGCGAACGATAACgtaataacacaataacataacaataacgaggctttatacagggggtactggtaccgagtcagtgcgggggtacaggttagagataatttgtacatttaggtagggatgaagtgactatgcatagataataaacaatgactagcagcagtgtacaaaacaaaggaggggggtcaatgtaaatagtccggtggccattttattaaaaatgcagcagtcttatggcttgggggtagaagctgttaatgagccttttggtcctagacttggaggTCTGGTACTACTtgacgtgcggtagcagagaaaacagtctatgatttAGGTGACTGGTAGCTCTCTCAATTTTATGGGCttccctctgacaccgcctattatataggtcctggattgcaggatgtttggccccagtggtgtactgggccgtacacactatccTTTGTAgatctggggacccataccaaatctcttcagtctcctgagcgggaaaaggttttgttgtgccctcttcacgactgtcttggtgtatttggaccatcgttggtgatgtggacaccaaggaacttgaaactctcaacccgctccactacagccccgttgatgttaatagGGGCCTGttctgccttttcctgtagtgcac

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1118671 True 1702 lncRNA 0.45 2 44433144 44434914
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110535727 NA coding downstream 14221 44346207 ~ 44418923 (-)
LOC110535726 LOC106580137 coding downstream 113442 44284283 ~ 44319702 (-)
ccnh ccnh coding downstream 249944 44175382 ~ 44183200 (-)
LOC110535721 NA coding downstream 313977 44106462 ~ 44119167 (-)
edil3a LOC106580141 coding downstream 802202 43383213 ~ 43630942 (-)
LOC118937358 NA coding upstream 661183 45096097 ~ 45098089 (-)
LOC110535733 LOC106580130 coding upstream 667565 45102479 ~ 45127262 (-)
LOC110536624 NA coding upstream 751568 45186482 ~ 45188376 (-)
LOC110535738 ntng2 coding upstream 1191805 45626719 ~ 45685891 (-)
LOC110535743 card9 coding upstream 1481680 45916594 ~ 45922287 (-)
G982566 NA non-coding downstream 196729 44236206 ~ 44236415 (-)
G982563 NA non-coding downstream 199558 44233280 ~ 44233586 (-)
G982426 NA non-coding downstream 400532 44030569 ~ 44032612 (-)
G981890 NA non-coding downstream 582767 43850178 ~ 43850377 (-)
G982755 NA non-coding upstream 131072 44565986 ~ 44566321 (-)
G982760 NA non-coding upstream 135259 44570173 ~ 44570451 (-)
G982870 NA non-coding upstream 188982 44623896 ~ 44624183 (-)
G982891 NA non-coding upstream 218857 44653771 ~ 44654091 (-)
G982899 NA non-coding upstream 235156 44670070 ~ 44670641 (-)
LOC110535714 LOC106580145 other downstream 1797082 42631822 ~ 42836577 (-)
kiaa0825 kiaa0825 other downstream 1841376 42425475 ~ 42591782 (-)
G980514 NA other downstream 1869414 42473810 ~ 42563730 (-)
G979041 NA other downstream 3159717 41273089 ~ 41273427 (-)
G975110 NA other downstream 6354617 38077851 ~ 38078527 (-)
G982818 LOC106613263 other upstream 174495 44609409 ~ 44609942 (-)
G983486 NA other upstream 664574 45099488 ~ 45100219 (-)
G984166 LOC106580127 other upstream 1170810 45605724 ~ 45606417 (-)
LOC110535758 foxn4 other upstream 1767795 46202709 ~ 46223082 (-)
G985191 fam222a other upstream 2104619 46539533 ~ 46541987 (-)

Expression

G982666 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G982666 Expression in each Bioproject

Bar chart with 20 bars.
G982666 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network