G982909


Basic Information

Item Value
gene id G982909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 44679610 ~ 44679847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1118917
TTCCAGATTGGCTTACCTTCATGACTtcaagtaatgatagactgtcatttctctttgctcatttgatctgttcttgccataatatggacttggtctttcaccaaatagggctatcttctgtataccacccctaacttgtcacaacacaactgattggctcaaatacaaatgaacttttaacaaggcacacctgttaattgaaatgcattccaggtgactacctcatgaatacCCAGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1118917 True 238 lncRNA 0.39 1 44679610 44679847

Neighbor

gene id symbol gene type direction distance location
LOC110535722 LOC106580138 coding upstream 501540 44119481 ~ 44178070 (+)
LOC110535720 NA coding upstream 646989 44030538 ~ 44054846 (+)
LOC110535025 LOC106580143 coding upstream 1471606 43157632 ~ 43208004 (+)
fam81b fam81b coding upstream 1818167 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 2049879 42592008 ~ 42629731 (+)
LOC110535730 LOC106580238 coding downstream 174655 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 209882 44889729 ~ 44895936 (+)
LOC110535026 LOC106580237 coding downstream 220270 44900117 ~ 44910458 (+)
LOC110535028 LOC106580235 coding downstream 314122 44993969 ~ 45004309 (+)
LOC110535732 LOC100196865 coding downstream 381391 45058392 ~ 45075192 (+)
G982858 NA non-coding upstream 28646 44650686 ~ 44650964 (+)
G982853 NA non-coding upstream 37079 44642283 ~ 44642531 (+)
G982836 NA non-coding upstream 55473 44623896 ~ 44624137 (+)
G982819 NA non-coding upstream 69301 44610073 ~ 44610309 (+)
G982814 NA non-coding upstream 72034 44607284 ~ 44607576 (+)
G982931 NA non-coding downstream 13132 44692979 ~ 44693376 (+)
G982954 NA non-coding downstream 26333 44706180 ~ 44706441 (+)
G982978 NA non-coding downstream 45667 44725514 ~ 44816175 (+)
G983276 NA non-coding downstream 283427 44963274 ~ 44963596 (+)
G983286 NA non-coding downstream 288903 44968750 ~ 44968974 (+)
G982236 LOC106580137 other upstream 393641 44280925 ~ 44285969 (+)
G981690 NA other upstream 964313 43660374 ~ 43715297 (+)
G980019 NA other upstream 2042901 42631824 ~ 42636709 (+)
G979965 NA other upstream 2146302 42528520 ~ 42533308 (+)
G979689 NA other upstream 2600755 42078492 ~ 42078855 (+)
LOC110535735 fibcd1 other downstream 703560 45189846 ~ 45413082 (+)
G984422 pesc other downstream 1428073 46107920 ~ 46109940 (+)
G985257 NA other downstream 1927545 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 2167856 46847703 ~ 46875441 (+)
G985401 NA other downstream 2243092 46922939 ~ 46923827 (+)

Expression


Co-expression Network