G982978


Basic Information

Item Value
gene id G982978
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 44725514 ~ 44816175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1118987
ccacaagccacctgggagattgcacaaatctggcctttatggaagagtgtcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaagatgttatgtttggcgtaaaagcaacacagctcatcaccctgaacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1118987 True 242 lncRNA 0.42 2 44725514 44816175

Neighbor

gene id symbol gene type direction distance location
LOC110535722 LOC106580138 coding upstream 547444 44119481 ~ 44178070 (+)
LOC110535720 NA coding upstream 692893 44030538 ~ 44054846 (+)
LOC110535025 LOC106580143 coding upstream 1517510 43157632 ~ 43208004 (+)
fam81b fam81b coding upstream 1864071 42839548 ~ 42861443 (+)
slf1 slf1 coding upstream 2095783 42592008 ~ 42629731 (+)
LOC110535730 LOC106580238 coding downstream 38327 44854502 ~ 44865316 (+)
LOC110536623 NA coding downstream 73554 44889729 ~ 44895936 (+)
LOC110535026 LOC106580237 coding downstream 83942 44900117 ~ 44910458 (+)
LOC110535028 LOC106580235 coding downstream 177794 44993969 ~ 45004309 (+)
LOC110535732 LOC100196865 coding downstream 245063 45058392 ~ 45075192 (+)
G982954 NA non-coding upstream 19073 44706180 ~ 44706441 (+)
G982931 NA non-coding upstream 32138 44692979 ~ 44693376 (+)
G982909 NA non-coding upstream 45667 44679610 ~ 44679847 (+)
G982858 NA non-coding upstream 74550 44650686 ~ 44650964 (+)
G982853 NA non-coding upstream 82983 44642283 ~ 44642531 (+)
G983276 NA non-coding downstream 147099 44963274 ~ 44963596 (+)
G983286 NA non-coding downstream 152575 44968750 ~ 44968974 (+)
G983391 NA non-coding downstream 229767 45045942 ~ 45046260 (+)
G983435 NA non-coding downstream 265029 45081204 ~ 45081443 (+)
G982236 LOC106580137 other upstream 439545 44280925 ~ 44285969 (+)
G981690 NA other upstream 1010217 43660374 ~ 43715297 (+)
G980019 NA other upstream 2088805 42631824 ~ 42636709 (+)
G979965 NA other upstream 2192206 42528520 ~ 42533308 (+)
G979689 NA other upstream 2646659 42078492 ~ 42078855 (+)
LOC110535735 fibcd1 other downstream 567232 45189846 ~ 45413082 (+)
G984422 pesc other downstream 1291745 46107920 ~ 46109940 (+)
G985257 NA other downstream 1791217 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 2031528 46847703 ~ 46875441 (+)
G985401 NA other downstream 2106764 46922939 ~ 46923827 (+)

Expression


Co-expression Network