G983435


Basic Information

Item Value
gene id G983435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 45081204 ~ 45081443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1119475
catggacgacgcaaggagggcattaatcagagaggcaacaaagagaccaaagataatcttgaaggagctacaaagctccacagaggagattggagtatctgtccaaaggaccactttaagccgtacactccacaaagctgggctttacggaagagtggccagaaaaaagccattgcttaaagaaaaaaataagcaaacatgtttggtgttcgccaaaaggcatgtgggaacatatggaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1119475 True 240 lncRNA 0.44 1 45081204 45081443

Neighbor

gene id symbol gene type direction distance location
LOC110535732 LOC100196865 coding upstream 7541 45058392 ~ 45075192 (+)
LOC110535028 LOC106580235 coding upstream 76895 44993969 ~ 45004309 (+)
LOC110535026 LOC106580237 coding upstream 170746 44900117 ~ 44910458 (+)
LOC110536623 NA coding upstream 185268 44889729 ~ 44895936 (+)
LOC110535730 LOC106580238 coding upstream 215888 44854502 ~ 44865316 (+)
LOC110535735 fibcd1 coding downstream 108403 45189846 ~ 45413082 (+)
LOC110535029 LOC106585784 coding downstream 355078 45436521 ~ 45447904 (+)
LOC110535736 LOC106580128 coding downstream 367705 45449148 ~ 45484204 (+)
LOC118937447 NA coding downstream 405698 45487141 ~ 45491870 (+)
LOC110535737 LOC106580127 coding downstream 421409 45502852 ~ 45614960 (+)
G983391 NA non-coding upstream 34944 45045942 ~ 45046260 (+)
G983286 NA non-coding upstream 112230 44968750 ~ 44968974 (+)
G983276 NA non-coding upstream 117608 44963274 ~ 44963596 (+)
G982978 NA non-coding upstream 265029 44725514 ~ 44816175 (+)
G983446 NA non-coding downstream 7307 45088750 ~ 45089596 (+)
G983454 NA non-coding downstream 10099 45091542 ~ 45091867 (+)
G983458 NA non-coding downstream 14594 45096037 ~ 45096338 (+)
G983463 NA non-coding downstream 16975 45098418 ~ 45098677 (+)
G983507 NA non-coding downstream 56819 45138262 ~ 45138727 (+)
G982236 LOC106580137 other upstream 795235 44280925 ~ 44285969 (+)
G981690 NA other upstream 1365907 43660374 ~ 43715297 (+)
G980019 NA other upstream 2444495 42631824 ~ 42636709 (+)
G979965 NA other upstream 2547896 42528520 ~ 42533308 (+)
G979689 NA other upstream 3002349 42078492 ~ 42078855 (+)
G984422 pesc other downstream 1026477 46107920 ~ 46109940 (+)
G985257 NA other downstream 1525949 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 1766260 46847703 ~ 46875441 (+)
G985401 NA other downstream 1841496 46922939 ~ 46923827 (+)

Expression


Co-expression Network