G983438



Basic Information


Item Value
gene id G983438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 45081504 ~ 45081708 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1119478
tcccagtctcaaatctcttgaagactaaaacaagtttccctcaagaatttccctgtatttagcgccacccgtcattccttcaattctgaccagtttcccagtccctgccgacgAAAACGTCCACACAGCATgatctgccactaccatgcttcactgtggagatggtgttctcggggtgatgagatgggttgggtttgtgccagac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1119478 True 205 lncRNA 0.49 1 45081504 45081708
Loading

Neighbor


gene id symbol gene type direction distance location
mef2cb LOC106580134 coding downstream 555502 44425190 ~ 44526002 (-)
LOC110535727 NA coding downstream 662581 44346207 ~ 44418923 (-)
LOC110535726 LOC106580137 coding downstream 761802 44284283 ~ 44319702 (-)
ccnh ccnh coding downstream 898304 44175382 ~ 44183200 (-)
LOC110535721 NA coding downstream 962337 44106462 ~ 44119167 (-)
LOC118937358 NA coding upstream 14389 45096097 ~ 45098089 (-)
LOC110535733 LOC106580130 coding upstream 20771 45102479 ~ 45127262 (-)
LOC110536624 NA coding upstream 104774 45186482 ~ 45188376 (-)
LOC110535738 ntng2 coding upstream 545011 45626719 ~ 45685891 (-)
LOC110535743 card9 coding upstream 834886 45916594 ~ 45922287 (-)
G983421 LOC100196865 non-coding downstream 6330 45058392 ~ 45075174 (-)
G983422 LOC100196865 non-coding downstream 13299 45065569 ~ 45068205 (-)
G983375 NA non-coding downstream 47143 45033593 ~ 45034361 (-)
G983200 NA non-coding downstream 196539 44884762 ~ 44884965 (-)
G983195 NA non-coding downstream 197809 44883387 ~ 44883695 (-)
G983447 NA non-coding upstream 5727 45087435 ~ 45087717 (-)
G983451 NA non-coding upstream 8102 45089810 ~ 45090150 (-)
G983465 NA non-coding upstream 16991 45098699 ~ 45098952 (-)
G983485 NA non-coding upstream 19348 45101056 ~ 45102028 (-)
G982818 LOC106613263 other downstream 471562 44609409 ~ 44609942 (-)
LOC110535714 LOC106580145 other downstream 2445442 42631822 ~ 42836577 (-)
kiaa0825 kiaa0825 other downstream 2489736 42425475 ~ 42591782 (-)
G980514 NA other downstream 2517774 42473810 ~ 42563730 (-)
G979041 NA other downstream 3808077 41273089 ~ 41273427 (-)
G983486 NA other upstream 17780 45099488 ~ 45100219 (-)
G984166 LOC106580127 other upstream 524016 45605724 ~ 45606417 (-)
LOC110535758 foxn4 other upstream 1121001 46202709 ~ 46223082 (-)
G985191 fam222a other upstream 1457825 46539533 ~ 46541987 (-)
gltpa gltp other upstream 1510648 46592176 ~ 46602166 (-)

Expression


G983438 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G983438 Expression in each Bioproject

Bar chart with 14 bars.
G983438 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network