G983953


Basic Information

Item Value
gene id G983953
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 45532308 ~ 45532726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1120019
cagactggggtgaaggttcaccttccaacaggacaacaaccctaagcacacagtcaagacaccGCTGGAGTGTCTTGGGGACAATtctcagaatgtccttgagtggcccagccagagcccgaacatCTCGGGataccagaaaatagctgtgcagcaacgctccccatccaactttacagagcttgagaggctgtaatcgctgccaaaggtgcttcaataaagtactgagtaaagggtctgaatacttatgtaaatgtcatatttaaaTATGCAAAAATCTCaatctgtttttactttgtcattatggggtattgtgtgtagattgagggggggggaacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1120019 True 340 lncRNA 0.46 2 45532308 45532726

Neighbor

gene id symbol gene type direction distance location
LOC118937447 NA coding upstream 40438 45487141 ~ 45491870 (+)
LOC110535736 LOC106580128 coding upstream 48104 45449148 ~ 45484204 (+)
LOC110535029 LOC106585784 coding upstream 84404 45436521 ~ 45447904 (+)
LOC110535735 fibcd1 coding upstream 119255 45189846 ~ 45413082 (+)
LOC110535732 LOC100196865 coding upstream 458645 45058392 ~ 45075192 (+)
LOC110535739 med27 coding downstream 154215 45686941 ~ 45787303 (+)
LOC110535740 rapgef1 coding downstream 287709 45820435 ~ 45866751 (+)
pomt1 pomt1 coding downstream 338103 45870829 ~ 45886895 (+)
chek2 chk2 coding downstream 424876 45957602 ~ 46060717 (+)
si:dkey-98f17.5 LOC106580116 coding downstream 460462 45993188 ~ 46012718 (+)
G983865 NA non-coding upstream 115087 45416850 ~ 45417221 (+)
G983544 NA non-coding upstream 360369 45171736 ~ 45171939 (+)
G983526 NA non-coding upstream 377748 45154334 ~ 45154560 (+)
G983525 NA non-coding upstream 378040 45154019 ~ 45154268 (+)
G983512 NA non-coding upstream 389272 45142732 ~ 45143036 (+)
G983969 NA non-coding downstream 19296 45552022 ~ 45552311 (+)
G983975 NA non-coding downstream 25145 45557871 ~ 45558091 (+)
G983981 NA non-coding downstream 33828 45566554 ~ 45566840 (+)
G983984 NA non-coding downstream 36736 45569462 ~ 45569721 (+)
G983989 NA non-coding downstream 44400 45577126 ~ 45577332 (+)
G982236 LOC106580137 other upstream 1246339 44280925 ~ 44285969 (+)
G981690 NA other upstream 1817011 43660374 ~ 43715297 (+)
G980019 NA other upstream 2895599 42631824 ~ 42636709 (+)
G979965 NA other upstream 2999000 42528520 ~ 42533308 (+)
G984422 pesc other downstream 575194 46107920 ~ 46109940 (+)
G985257 NA other downstream 1074666 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 1314977 46847703 ~ 46875441 (+)
G985401 NA other downstream 1390213 46922939 ~ 46923827 (+)
G985597 NA other downstream 1718586 47251312 ~ 47252236 (+)

Expression


Co-expression Network