G983989


Basic Information

Item Value
gene id G983989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 45577126 ~ 45577332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1120056
gtggCACCTCACTGGGTGGTAGAATGACACTCTTCAGACAGTATCGTGGTTGCTGACTGTTCTATACTGTTGCTGTGAATCATTTTACATTTaattcatttagcagacgctcttatccagagtgacttagagTCATGCAGGGATTTATATGGTTCTTAacctacacacacagtacaggttCTTGTTGAGGTGGGAGAGGGATTGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1120056 True 207 lncRNA 0.43 1 45577126 45577332

Neighbor

gene id symbol gene type direction distance location
LOC118937447 NA coding upstream 85256 45487141 ~ 45491870 (+)
LOC110535736 LOC106580128 coding upstream 92922 45449148 ~ 45484204 (+)
LOC110535029 LOC106585784 coding upstream 129222 45436521 ~ 45447904 (+)
LOC110535735 fibcd1 coding upstream 164073 45189846 ~ 45413082 (+)
LOC110535732 LOC100196865 coding upstream 503463 45058392 ~ 45075192 (+)
LOC110535739 med27 coding downstream 109609 45686941 ~ 45787303 (+)
LOC110535740 rapgef1 coding downstream 243103 45820435 ~ 45866751 (+)
pomt1 pomt1 coding downstream 293497 45870829 ~ 45886895 (+)
chek2 chk2 coding downstream 380270 45957602 ~ 46060717 (+)
si:dkey-98f17.5 LOC106580116 coding downstream 415856 45993188 ~ 46012718 (+)
G983984 NA non-coding upstream 7405 45569462 ~ 45569721 (+)
G983981 NA non-coding upstream 10286 45566554 ~ 45566840 (+)
G983975 NA non-coding upstream 19035 45557871 ~ 45558091 (+)
G983969 NA non-coding upstream 24815 45552022 ~ 45552311 (+)
G983953 NA non-coding upstream 44400 45532308 ~ 45532726 (+)
G983991 NA non-coding downstream 2419 45579751 ~ 45580033 (+)
G984002 NA non-coding downstream 16007 45593339 ~ 45593713 (+)
G983933 NA non-coding downstream 39071 45616403 ~ 45618447 (+)
G984013 NA non-coding downstream 45934 45623266 ~ 45624058 (+)
G984227 LOC100194703 non-coding downstream 117835 45695167 ~ 45760702 (+)
G982236 LOC106580137 other upstream 1291157 44280925 ~ 44285969 (+)
G981690 NA other upstream 1861829 43660374 ~ 43715297 (+)
G980019 NA other upstream 2940417 42631824 ~ 42636709 (+)
G979965 NA other upstream 3043818 42528520 ~ 42533308 (+)
G984422 pesc other downstream 530588 46107920 ~ 46109940 (+)
G985257 NA other downstream 1030060 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 1270371 46847703 ~ 46875441 (+)
G985401 NA other downstream 1345607 46922939 ~ 46923827 (+)
G985597 NA other downstream 1673980 47251312 ~ 47252236 (+)

Expression


Co-expression Network