G984002


Basic Information

Item Value
gene id G984002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 45593339 ~ 45593713 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1120069
atacactcaattagtatttggtagcattgccttcaaattgtttaacttgggtcaaacgttttgggtagccttccacaagcttcccacaataagttttggcccattcctcctgacagagctggtgtaactgagtcaggtttgttggactccttgctcgcacatgctttttcagttctgtccacacattttctatgggatggaggtgagggctttgtgatagccactcaaataccttgactttgttgtccttaaatcattttgccacaactttggaagtattctcggggtcattgtccatttggaagaccaatttgcgaccaagctttaacttcctgactgatgtcttgagatgttgcttcaatatatccacataat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1120069 True 375 lncRNA 0.42 1 45593339 45593713

Neighbor

gene id symbol gene type direction distance location
LOC118937447 NA coding upstream 101469 45487141 ~ 45491870 (+)
LOC110535736 LOC106580128 coding upstream 109135 45449148 ~ 45484204 (+)
LOC110535029 LOC106585784 coding upstream 145435 45436521 ~ 45447904 (+)
LOC110535735 fibcd1 coding upstream 180286 45189846 ~ 45413082 (+)
LOC110535732 LOC100196865 coding upstream 519676 45058392 ~ 45075192 (+)
LOC110535739 med27 coding downstream 93228 45686941 ~ 45787303 (+)
LOC110535740 rapgef1 coding downstream 226722 45820435 ~ 45866751 (+)
pomt1 pomt1 coding downstream 277116 45870829 ~ 45886895 (+)
chek2 chk2 coding downstream 363889 45957602 ~ 46060717 (+)
si:dkey-98f17.5 LOC106580116 coding downstream 399475 45993188 ~ 46012718 (+)
G983991 NA non-coding upstream 13306 45579751 ~ 45580033 (+)
G983989 NA non-coding upstream 16007 45577126 ~ 45577332 (+)
G983984 NA non-coding upstream 23618 45569462 ~ 45569721 (+)
G983981 NA non-coding upstream 26499 45566554 ~ 45566840 (+)
G983975 NA non-coding upstream 35248 45557871 ~ 45558091 (+)
G983933 NA non-coding downstream 22690 45616403 ~ 45618447 (+)
G984013 NA non-coding downstream 29553 45623266 ~ 45624058 (+)
G984227 LOC100194703 non-coding downstream 101454 45695167 ~ 45760702 (+)
G984299 NA non-coding downstream 274309 45868022 ~ 45868272 (+)
G982236 LOC106580137 other upstream 1307370 44280925 ~ 44285969 (+)
G981690 NA other upstream 1878042 43660374 ~ 43715297 (+)
G980019 NA other upstream 2956630 42631824 ~ 42636709 (+)
G979965 NA other upstream 3060031 42528520 ~ 42533308 (+)
G984422 pesc other downstream 514207 46107920 ~ 46109940 (+)
G985257 NA other downstream 1013679 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 1253990 46847703 ~ 46875441 (+)
G985401 NA other downstream 1329226 46922939 ~ 46923827 (+)
G985597 NA other downstream 1657599 47251312 ~ 47252236 (+)

Expression


Co-expression Network