G984299


Basic Information

Item Value
gene id G984299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 45868022 ~ 45868272 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1120393
caaggagaatactgatggactgttgtttctctttgcttttttgagctgttcttgccataatatggacttggtcttttaccaaatagggctatcttctctataccacccttaccttgtcacaacacaactgattggctcaaacgcattaagaaggaaagaaattccacaaatgaacttttaacaaggcatacctgttaattgaaatgcattccaggtgactaagctgaagctgcttgagagaatgccaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1120393 True 251 lncRNA 0.40 1 45868022 45868272

Neighbor

gene id symbol gene type direction distance location
LOC110535740 rapgef1 coding upstream 2661 45820435 ~ 45866751 (+)
LOC110535739 med27 coding upstream 80719 45686941 ~ 45787303 (+)
LOC110535737 LOC106580127 coding upstream 253062 45502852 ~ 45614960 (+)
LOC118937447 NA coding upstream 376152 45487141 ~ 45491870 (+)
LOC110535736 LOC106580128 coding upstream 383818 45449148 ~ 45484204 (+)
pomt1 pomt1 coding downstream 2557 45870829 ~ 45886895 (+)
chek2 chk2 coding downstream 89330 45957602 ~ 46060717 (+)
si:dkey-98f17.5 LOC106580116 coding downstream 124916 45993188 ~ 46012718 (+)
p2rx2 LOC106580269 coding downstream 259965 46128237 ~ 46133048 (+)
LOC110535755 NA coding downstream 294747 46163019 ~ 46203981 (+)
G984227 LOC100194703 non-coding upstream 107320 45695167 ~ 45760702 (+)
G984013 NA non-coding upstream 243964 45623266 ~ 45624058 (+)
G983933 NA non-coding upstream 249575 45616403 ~ 45618447 (+)
G984002 NA non-coding upstream 274309 45593339 ~ 45593713 (+)
G984310 NA non-coding downstream 21166 45889438 ~ 45916391 (+)
G984309 NA non-coding downstream 22480 45890752 ~ 45895227 (+)
G984342 NA non-coding downstream 103176 45971448 ~ 45987832 (+)
G984361 NA non-coding downstream 140403 46008675 ~ 46017778 (+)
LOC110535735 fibcd1 other upstream 454940 45189846 ~ 45413082 (+)
G982236 LOC106580137 other upstream 1582053 44280925 ~ 44285969 (+)
G981690 NA other upstream 2152725 43660374 ~ 43715297 (+)
G980019 NA other upstream 3231313 42631824 ~ 42636709 (+)
G979965 NA other upstream 3334714 42528520 ~ 42533308 (+)
G984422 pesc other downstream 239648 46107920 ~ 46109940 (+)
G985257 NA other downstream 739120 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 979431 46847703 ~ 46875441 (+)
G985401 NA other downstream 1054667 46922939 ~ 46923827 (+)
G985597 NA other downstream 1383040 47251312 ~ 47252236 (+)

Expression


Co-expression Network