G984406


Basic Information

Item Value
gene id G984406
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 46068004 ~ 46069268 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1120548
GGTCATTTATTAAAGCTTTGAGTACACGCAACCAACGTGAACAAACATTTGACTTAGCAGCATGTCGTCATAACTAAAACAGAGTATTTGAGTGGGCTTATTTCTGCAAACTGTACAGCCGCTGCTGGTTCAGAGACTTAGAAATATAGGTCCTGTGTTTGCCAATGTTAAATATCCATTCAATTCCAATGTCAATGTCAAACTAAACATGGTTCTCCCAAGCTTAGATAAACACCACTCAAGTACTAGACATGCCATAGCTAATCTGAAACCATCTTGACCGCGAAGCAGAGGTTGGAAATACTTAGCCATTCAATGAACACACTGAATTAGTTGCTAAGGGAAACCGAATCCCCTTAGAATAATGACCACGTACTGCAACTATGTCTTAAATACTTcgtaaaatgtattttgtaataGTGCAACcataaataattattatatgatagatacatatacagtatgtaccagtggaggctgcaaaggggaggacggctcataataaatgGCTGGAATGTAGCGAATGGAATTGAATCAAAGACATGGAATCCATGTTTGATGAATTTGAtaccgctccagtcattaccacgagctcgttctccccaattaaggtgccaccaacctcctgtggtatgtaCTCTTACTATGCAGGAGAATTcaactttctttcttttttacacCATTTCTGAAATTAGAAGATTAATATACGAGGAAATAAGTAGATGAAAAAGGGTACTTATAAACCATGCTAACTGAAATCAGGCTAACTGAACAAGGATGAACGGAAGGTTACTTCATGCTAGCGCAATCGTGAAGGTCAGCATTCTCAAGCCTGGCCCAGATGTACACATTCAGGTGATCATTTTCCAATAAGAGAGCTGATACAAGGTAACCCAGCATAGATACAAATTGACATTTAGGACAAGGATGAAGAAATGCTATGTAAAGGCCCACAGTAACGTATAAGGCAGTGGCTGCTAGtggaaggagaAATGACtaaagagggagggagcagaCACGGAGGGCTTCGGTAGGCGGTAGGGAGAAGTGAGCAGCCTGGTCCTAGATGTCGGAGCCCATCTCTGCACACTGCTTGTCTGATATGTGTGAGGCAAGGGACTCGATGATgtccagcagcagcagctggCTGAGGGACCTCAGGTTGGGGAGCTTGGACACCTtcagaagggggaggggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1120548 True 1199 lncRNA 0.43 2 46068004 46069268

Neighbor

gene id symbol gene type direction distance location
si:dkey-98f17.5 LOC106580116 coding upstream 56269 45993188 ~ 46012718 (+)
chek2 chk2 coding upstream 101381 45957602 ~ 46060717 (+)
pomt1 pomt1 coding upstream 181109 45870829 ~ 45886895 (+)
LOC110535740 rapgef1 coding upstream 202643 45820435 ~ 45866751 (+)
LOC110535739 med27 coding upstream 280701 45686941 ~ 45787303 (+)
p2rx2 LOC106580269 coding downstream 58969 46128237 ~ 46133048 (+)
LOC110535755 NA coding downstream 93751 46163019 ~ 46203981 (+)
LOC110535759 myo1h coding downstream 165801 46235069 ~ 46282246 (+)
LOC110535760 LOC106580104 coding downstream 232229 46301497 ~ 46326649 (+)
mvk mvk coding downstream 266317 46335585 ~ 46360745 (+)
G984361 NA non-coding upstream 50226 46008675 ~ 46017778 (+)
G984342 NA non-coding upstream 80172 45971448 ~ 45987832 (+)
G984310 NA non-coding upstream 151613 45889438 ~ 45916391 (+)
G984439 NA non-coding downstream 66414 46135682 ~ 46136223 (+)
G984482 NA non-coding downstream 154439 46223707 ~ 46223979 (+)
G984526 NA non-coding downstream 219956 46289224 ~ 46289425 (+)
G984545 NA non-coding downstream 258791 46328059 ~ 46328343 (+)
LOC110535735 fibcd1 other upstream 654922 45189846 ~ 45413082 (+)
G982236 LOC106580137 other upstream 1782035 44280925 ~ 44285969 (+)
G981690 NA other upstream 2352707 43660374 ~ 43715297 (+)
G980019 NA other upstream 3431295 42631824 ~ 42636709 (+)
G979965 NA other upstream 3534696 42528520 ~ 42533308 (+)
G984422 pesc other downstream 38652 46107920 ~ 46109940 (+)
G985257 NA other downstream 538124 46607392 ~ 46607681 (+)
G985387 LOC106586052 other downstream 778435 46847703 ~ 46875441 (+)
G985401 NA other downstream 853671 46922939 ~ 46923827 (+)
G985597 NA other downstream 1182044 47251312 ~ 47252236 (+)

Expression


Co-expression Network