G984858



Basic Information


Item Value
gene id G984858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 46127426 ~ 46127647 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1121106
atccaaaaccatctcaattgggttgaggttgggtgattgtggaggccaggtcatctgatgcagcactacatcactctctttcttggtcaaatagcccttacacagcctggaggtgtgttgggtcattgtcctgtctaaaaacaaatgatagtgccaCTAAGCGCaatccagatgggatggcatatcgctgcagaatgctgtgatgaccatgctggttatgtg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1121106 True 222 lncRNA 0.47 1 46127426 46127647
Loading

Neighbor


gene id symbol gene type direction distance location
pes pesc coding downstream 941 46107907 ~ 46126485 (-)
gal3st1a LOC106580113 coding downstream 21618 46085454 ~ 46105808 (-)
lztr1 lztr1 coding downstream 46671 46067991 ~ 46080755 (-)
LOC110535750 LOC105014428 coding downstream 59582 46031189 ~ 46067844 (-)
LOC110535749 LOC106580115 coding downstream 96209 46016311 ~ 46031217 (-)
pole pole coding upstream 7979 46135626 ~ 46172608 (-)
LOC110535758 foxn4 coding upstream 77842 46202709 ~ 46223082 (-)
LOC110535030 kctd10 coding upstream 152549 46280196 ~ 46286223 (-)
mmab mmab coding upstream 203595 46331242 ~ 46335481 (-)
LOC110535765 trpv4 coding upstream 435934 46563581 ~ 46586735 (-)
G984856 NA non-coding downstream 2881 46122845 ~ 46124545 (-)
G984809 NA non-coding downstream 114701 46010752 ~ 46012725 (-)
G984742 NA non-coding downstream 257203 45870010 ~ 45870223 (-)
G984737 NA non-coding downstream 260676 45865112 ~ 45866750 (-)
G984602 NA non-coding downstream 427853 45687016 ~ 45699573 (-)
G984859 LOC106580269 non-coding upstream 354 46128001 ~ 46133058 (-)
G984893 NA non-coding upstream 66536 46194183 ~ 46194733 (-)
G984908 NA non-coding upstream 97831 46225478 ~ 46225685 (-)
G984909 NA non-coding upstream 101585 46229232 ~ 46229432 (-)
G984166 LOC106580127 other downstream 521009 45605724 ~ 45606417 (-)
G983486 NA other downstream 1027207 45099488 ~ 45100219 (-)
G982818 LOC106613263 other downstream 1517484 44609409 ~ 44609942 (-)
LOC110535714 LOC106580145 other downstream 3491364 42631822 ~ 42836577 (-)
kiaa0825 kiaa0825 other downstream 3535658 42425475 ~ 42591782 (-)
G985191 fam222a other upstream 411886 46539533 ~ 46541987 (-)
gltpa gltp other upstream 464709 46592176 ~ 46602166 (-)
G985626 NA other upstream 518681 46646328 ~ 46646949 (-)
G985699 LOC106613263 other upstream 666972 46793282 ~ 46801092 (-)

Expression


G984858 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

G984858 Expression in each Bioproject

Bar chart with 17 bars.
G984858 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network