G984893



Basic Information


Item Value
gene id G984893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 46194183 ~ 46194733 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1121150
TTGTAAGGGTCCTGGGGGTCGGTCCAGGCAACCTGGAACATGTGTCGTATCTCCTCGGCCAGGCCGATGCGCGCCCCGCTGTTGGCTGAGATGTAGATGCGTGGAATGCCCTCGGCCCGGGCCATCTCCGACGCCCGCAGGAACAGCTGGTCCTCCTGGGGCCCGAACGACCCAATCATGTAGGTGATGTCGttgcagatgatgatgatgtcgcGGCCCTCGGGATACTCTGGAGTCTTCATCCGCATCCGGAAGGCTACCATTCCCacCTCGTTGTCTCCAGGCAGGCGGTTCATCTGCACCAGTCGGTCATGCGGGTCCAGCACCAGCTCGGTGCACATCAGCACGTCTTTAGGGTAGCTGTCCCCCGGACCCCAAAGCTTAAAGAGGGC

Function


NR:

description
acetyl-CoA carboxylase 2 isoform X2

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1121150 True 392 lncRNA 0.61 2 46194183 46194733
Loading

Neighbor


gene id symbol gene type direction distance location
pole pole coding downstream 21575 46135626 ~ 46172608 (-)
pes pesc coding downstream 67698 46107907 ~ 46126485 (-)
gal3st1a LOC106580113 coding downstream 88375 46085454 ~ 46105808 (-)
lztr1 lztr1 coding downstream 113428 46067991 ~ 46080755 (-)
LOC110535750 LOC105014428 coding downstream 126339 46031189 ~ 46067844 (-)
LOC110535758 foxn4 coding upstream 10756 46202709 ~ 46223082 (-)
LOC110535030 kctd10 coding upstream 85463 46280196 ~ 46286223 (-)
mmab mmab coding upstream 136509 46331242 ~ 46335481 (-)
LOC110535765 trpv4 coding upstream 368848 46563581 ~ 46586735 (-)
gltpa gltp coding upstream 397443 46592176 ~ 46602166 (-)
G984859 LOC106580269 non-coding downstream 61125 46128001 ~ 46133058 (-)
G984858 NA non-coding downstream 66536 46127426 ~ 46127647 (-)
G984856 NA non-coding downstream 69638 46122845 ~ 46124545 (-)
G984809 NA non-coding downstream 181458 46010752 ~ 46012725 (-)
G984742 NA non-coding downstream 323960 45870010 ~ 45870223 (-)
G984908 NA non-coding upstream 30745 46225478 ~ 46225685 (-)
G984909 NA non-coding upstream 34499 46229232 ~ 46229432 (-)
G984911 NA non-coding upstream 35599 46230332 ~ 46230552 (-)
G984919 NA non-coding upstream 48135 46242868 ~ 46243577 (-)
G984166 LOC106580127 other downstream 587766 45605724 ~ 45606417 (-)
G983486 NA other downstream 1093964 45099488 ~ 45100219 (-)
G982818 LOC106613263 other downstream 1584241 44609409 ~ 44609942 (-)
LOC110535714 LOC106580145 other downstream 3558121 42631822 ~ 42836577 (-)
kiaa0825 kiaa0825 other downstream 3602415 42425475 ~ 42591782 (-)
G985191 fam222a other upstream 344800 46539533 ~ 46541987 (-)
G985626 NA other upstream 451595 46646328 ~ 46646949 (-)
G985699 LOC106613263 other upstream 599886 46793282 ~ 46801092 (-)

Expression


G984893 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G984893 Expression in each Bioproject

Bar chart with 15 bars.
G984893 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.

Co-expression Network