XLOC_028793 (itih2)


Basic Information

Item Value
gene id XLOC_028793
gene name itih2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 25187912 ~ 25215968 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055796
AAATATTGATGAGGCTCAGAGGTCTGCAGGACGGCCCGGCATTCATCATTTTGCCCTtagtctctgtgtgtttgtgtgtgtgtctatgtaaaGGATTTTCTGAGTTTTCTCCATGAAGACTGTGTTTCTTCTAGGCTTCCTGCTCTTTTATCAGAGCTGGGCTTTCGAGTTTATTATTGATGGTGAATGGGAAAGTGAAATGTCAGATCCTTTGGATCACCATCATGACTCTGGAAGATACAGGaGAAACGTTTTGACCAGTGGAGAGGAAGAAGAGGATTTTGTGGCAATACAGGGCAATGACATCACAGTGAAGAGCTATAAGGTGGAGAGCAAAATCACGTCTCGCTTCGCTCACACCAAAGTCAAGAGCTCAGTGGTGAACTCGGGCCTGCAGGCGCAGAGCATCGGCTTTAATGTGCAGATCCCCAAACGAGCCTTCATTAACAACTTCACCATGAATGTCAATGGGATCACATTCGTCGGTTCTGTGAAGGAGAAGACTGTCGCTCGAAACCTTTACGCTCAAGCAAGAGCTCGTGGGAAAGCAGCTGGCATTGTCAGGACGAACTCTCAAGCAATGGAGACGTTTCGGACAGAAGTGCACGTTCCTGCAGGCAGTAAAGTGGAGTTTGAGTTGCACTATCAGGAGCTGATGCAGAGGAAGCTTGGCATTTATCAGCACACATTACATATTCAGCCTGGACGCCTTGTTCCCCTGCTGCAGGTTGACGTGTATATATTTGAGCCCAAAGGCATCAAGTTTGTCACAGCTCCAAACACACTGGGAAAGCAGTTTGAAGATCTGACCACAATCACCCACACTAAAGAAAAAGCCCACATTGTGTTCAAACCAAATCTGCAGCAGCAGCGCAAGTGTGAAAACTGCACCGAGAGCGCAGTGGATGGGGTTTTCACCGTCACCTATGATGTCGAGAGAGAGACCAATGCTGGAGAACTTCAGGTGTCTGATGGCCATTTTGTCCAATTCTTTGCTCCGTCTGATCTCACTCCTCTTTCCAAAAACATAGTTTTTGTGATTGATGTGAGTGGCAGCATGTGGGGACTCAAGATGAAACAGACTGTGGAGGCGATGAAGGCTATACTGGACGATCTGTCAATTGACGACTACTTTAGCATAATAGATTTCAATCACAATGTCCGTTGCTGGAGTGAAGATCTGGTCCAGGCTTCCTCAATCCAGGTGGATGAAGCCAAGAAGTACATCCAAAACATCAAACCTAATGGAGGCACCAACATCAACGAGGCTTTACTGCGAGCGATTCAGATGCTGATCAAAGCATCCCATCATGGCCTGATTGACCCTCGCTCTGTCTCTATGATTATCCTGGTGTCAGATGGAGATCCAACAGTCGGTGAAATAAAGCTGAGCACTATTCAGAAAAATGTGAAACTTCGCATGAAAGAGGAGTTTTCCCTGTTTTCTCTTGGAATCGGTTTCGATGTCGACTTTGACTTTTTGGAGCGAATCGCTATGGACAACAGAGGCATCGCCCAAAGGATTTATGCCAACCAAAATGCCGCAGAACAGTTAAAGACATTTTACAGTCAGGTTTCCTCTCCTCTCCTGAGGACCATCACCATTCATTTTCCTGAAAACACAGTGAATAATGTAACTCAAAACCGTTTCGACAAATTCTTCAGCGGTTCTGAGCTGATAGTGGCTGGAAAACTCCAACCATCAGACCTCACCACACTCCAGAGCTTCATCACCGCCTCTGCTgcCAACATGGACCTGAACATTCAGGCGGAGGCAGATATTCAGGCGTTGGACACTGTACTTAGCAGACATCAACATTCCTACAATGACTTTGCTCGGCAGATGTGGGGCTACATTACTGTGAATCAGCTACTGGCTGAACGCTCTCTAGCTCGTACAGCATCCAGGAAGCGTAAGATCACCCAAAGGATTGTGGCCTTGGCTGTGGAGCATCAGTTTGTGACCCCTTTGACCGCGATGCTGGTGGAGAGTAATGAAGAAGGGAGGCCAGAACGACTGATTGCAGACTCGCCCAAAGACTCCAAACATGGCTGCTGCTCAGcCACTGGTTCTCTATCTGGACAAATGCCAGTGCAACGGTTAGTCTATCAGAATCCTCCTTGGATCCTGCCCACACCAGGTCCAACTTTTGTAGCCGAAGCAGTTGGATCTCAAGAAAGCATCATTCCGGTTCACATCACTGGCGTGGATAGTGACCCCCACTTCATCATTAACTTACCCAAAAGCAACATGGACATCTGCTTCAACATTGACTCCAAACCTGGACACATCCTCAACCTGATTTCAGATCCTGGAACAGGAGTCACAGTCAACGGCCAGTTGATCGGATCCAAGATGTTGAAGAACAacaaattaaacacatatttcGGCACCATCTCCATATACTCTAAAACTGACGGTGTTCAGGTGATCGTTGGAACTGACAGAATTGACTTGATGGAGAGCAAGAACAATCACTCCTTCTCCTGGGGAGCTACTGCTGAGCTGACGCTTAACAGAATTAAGGTTACCATTTTGAAGGAGCAGCATGTCACTGTGTTGATTGATGGGAGGATTTCAGTGATGGTGCTTCTGCATCGGGTGTGGAAGAAGCATCCCGTGCAGGTGGACTTTCTGGGCATTTACATgtccaacaacaacaaatactCCACTCAAGTTCATGGTCTTGTTGGTCAGTTTGCAAAGGAACCAGAGGTTAAGGTGTATGACGTGCATGAAGGGGCAGATCCAAAAAAGAAAGAGGCTACAATGGAGGTGAAAGGCAACAAATTGGCTGTTACCAGGGGCTGGCAGAAGGACTACAGACGTGACCGAAAGCGAGGTTCAGACATCTATTGCTGGTTTGTCCATAACAACGGGAAAGGCTTTGTTGATGGCAATTACACCAACTATATCCTGCCTCAGCTGGACAGCTTCCTGATTGCACTCTAACAGCGAGAAAGCAATCATCTGTTATTTTATAAGCTATAATAACCAACCAAAAACATGACATTAAAAAAGAAGGTTTTTTAATactatacaaaaaatatataaaaaacatgaatATGTAGAGCTGTACATGAATCGactaaattttattaataaagaaaGCAATCCAGATTGACAACATTAACAACACTTTACTGTTGAATAATTGGAGTAATTCAGATATTTAATAATATGCAACCATTGTcactgacaataaaaaataacaatgcacAACAACACAATAAAAACCCATTGGTCAATTTGTTCCAtta
>TCONS_00055795
AAATATTGATGAGGCTCAGAGGTCTGCAGGACGGCCCGGCATTCATCATTTTGCCCTtagtctctgtgtgtttgtgtgtgtgtctatgtaaaGGATTTTCTGAGTTTTCTCCATGAAGACTGTGTTTCTTCTAGGCTTCCTGCTCTTTTATCAGAGCTGGGCTTTCGAGTTTATTATTGATGGTGAATGGGAAAGTGAAATGTCAGATCCTTTGGATCACCATCATGACTCTGGAAGATACAGGaGAAACGTTTTGACCAGTGGAGAGGAAGAAGAGGATTTTGTGGCAATACAGGGCAATGACATCACAGTGAAGAGCTATAAGGTGGAGAGCAAAATCACGTCTCGCTTCGCTCACACCAAAGTCAAGAGCTCAGTGGTGAACTCGGGCCTGCAGGCGCAGAGCATCGGCTTTAATGTGCAGATCCCCAAACGAGCCTTCATTAACAACTTCACCATGAATGTCAATGGGATCACATTCGTCGGTTCTGTGAAGGAGAAGACTGTCGCTCGAAACCTTTACGCTCAAGCAAGAGCTCGTGGGAAAGCAGCTGGCATTGTCAGGACGAACTCTCAAGCAATGGAGACGTTTCGGACAGAAGTGCACGTTCCTGCAGGCAGTAAAGTGGAGTTTGAGTTGCACTATCAGGAGCTGATGCAGAGGAAGCTTGGCATTTATCAGCACACATTACATATTCAGCCTGGACGCCTTGTTCCCCTGCTGCAGGTTGACGTGTATATATTTGAGCCCAAAGGCATCAAGTTTGTCACAGCTCCAAACACACTGGGAAAGCAGTTTGAAGATCTGACCACAATCACCCACACTAAAGAAAAAGCCCACATTGTGTTCAAACCAAATCTGCAGCAGCAGCGCAAGTGTGAAAACTGCACCGAGAGCGCAGTGGATGGGGTTTTCACCGTCACCTATGATGTCGAGAGAGAGACCAATATGCTGATCAAAGCATCCCATCATGGCCTGATTGACCCTCGCTCTGTCTCTATGATTATCCTGGTGTCAGATGGAGATCCAACAGTCGGTGAAATAAAGCTGAGCACTATTCAGAAAAATGTGAAACTTCGCATGAAAGAGGAGTTTTCCCTGTTTTCTCTTGGAATCGGTTTCGATGTCGACTTTGACTTTTTGGAGCGAATCGCTATGGACAACAGAGGCATCGCCCAAAGGATTTATGCCAACCAAAATGCCGCAGAACAGTTAAAGACATTTTACAGTCAGGTTTCCTCTCCTCTCCTGAGGACCATCACCATTCATTTTCCTGAAAACACAGTGAATAATGTAACTCAAAACCGTTTCGACAAATTCTTCAGCGGTTCTGAGCTGATAGTGGCTGGAAAACTCCAACCATCAGACCTCACCACACTCCAGAGCTTCATCACCGCCTCTGCTgcCAACATGGACCTGAACATTCAGGCGGAGGCAGATATTCAGGCGTTGGACACTGTACTTAGCAGACATCAACATTCCTACAATGACTTTGCTCGGCAGATGTGGGGCTACATTACTGTGAATCAGCTACTGGCTGAACGCTCTCTAGCTCGTACAGCATCCAGGAAGCGTAAGATCACCCAAAGGATTGTGGCCTTGGCTGTGGAGCATCAGTTTGTGACCCCTTTGACCGCGATGCTGGTGGAGAGTAATGAAGAAGGGAGGCCAGAACGACTGATTGCAGACTCGCCCAAAGACTCCAAACATGGCTGCTGCTCAGcCACTGGTTCTCTATCTGGACAAATGCCAGTGCAACGGTTATTGATCGGATCCAAGATGTTGAAGAACAacaaattaaacacatatttcGGCACCATCTCCATATACTCTAAAACTGACGGTGTTCAGGTGATCGTTGGAACTGACAGAATTGACTTGATGGAGAGCAAGAACAATCACTCCTTCTCCTGGGGAGCTACTGCTGAGCTGACGCTTAACAGAATTAAGGTTACCATTTTGAAGGAGCAGCATGTCACTGTGTTGATTGATGGGAGGATTTCAGTGATGGTGCTTCTGCATCGGGTGTGGAAGAAGCATCCCGTGCAGGTGGACTTTCTGGGCATTTACATgtccaacaacaacaaatactCCACTCAAGTTCATGGTCTTGTTGGTCAGTTTGCAAAGGAACCAGAGGTTAAGGTGTATGACGTGCATGAAGGGGCAGATCCAAAAAAGAAAGAGGCTACAATGGAGGTGAAAGGCAACAAATTGGCTGTTACCAGGGGCTGGCAGAAGGACTACAGACGTGACCGAAAGCGAGGTTCAGACATCTATTGCTGGTTTGTCCATAACAACGGGAAAGGCTTTGTTGATGGCAATTACACCAACTATATCCTGCCTCAGCTGGACAGCTTCCTGATTGCACTCTAACAGCGAGAAAGCAATCATCTGTTATTTTATAAGCTATAATAACCAACCAAAAACATGACATTAAAAAAGAAGGTTTTTTAATactatacaaaaaatatataaaaaacatgaatATGTAGAGCTGTACATGAATCGactaaattttattaataaagaaaGCAATCCAGATTGACAACATTAACAACACTTTACTGTTGAATAATTGGAGTAATTCAGATATTTAATAATATGCAACCATTGTcactgacaataaaaaataacaatgcacAACAACACAATAAAAACCCATTGGTCAATTTGTTCCAtta

Function

symbol description
itih2 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within hyaluronan metabolic process and negative regulation of peptidase activity. Predicted to be located in extracellular region. Is expressed in ball; extension; liver; and yolk syncytial layer. Orthologous to human ITIH2 (inter-alpha-trypsin inhibitor heavy chain 2).

GO:

id name namespace
GO:0030212 hyaluronan metabolic process biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko00536 Glycosaminoglycan binding proteins

ZFIN:

id description
ZDB-GENE-040426-1942 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within hyaluronan metabolic process and negative regulation of peptidase activity. Predicted to be located in extracellular region. Is expressed in ball; extension; liver; and yolk syncytial layer. Orthologous to human ITIH2 (inter-alpha-trypsin inhibitor heavy chain 2).

Ensembl:

ensembl_id ENSDARG00000045516

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055796 False 3261 mRNA 0.45 20 25187912 25215968
TCONS_00055795 True 2685 mRNA 0.45 17 25187912 25215968

Neighbor

gene id symbol gene type direction distance location
XLOC_028792 atp5f1c coding downstream 6360 25173299 ~ 25181552 (-)
XLOC_028791 taf3 coding downstream 19454 25084228 ~ 25168458 (-)
XLOC_028790 gata3 coding downstream 123402 25054510 ~ 25064510 (-)
XLOC_028789 NA coding downstream 138905 24833526 ~ 25049007 (-)
XLOC_028788 NA coding downstream 397171 24726095 ~ 24790741 (-)
XLOC_028794 NA coding upstream 29063 25245031 ~ 25247848 (-)
XLOC_028795 tmem110l coding upstream 35887 25251855 ~ 25271455 (-)
XLOC_028796 pfkfb3 coding upstream 256537 25472505 ~ 25485404 (-)
XLOC_028797 NA coding upstream 278488 25494456 ~ 25497067 (-)
XLOC_028798 rbm17 coding upstream 281136 25497104 ~ 25515591 (-)
XLOC_028787 NA non-coding downstream 544403 24501129 ~ 24643509 (-)
XLOC_028786 NA non-coding downstream 811887 24253766 ~ 24376025 (-)
XLOC_028784 NA non-coding downstream 1313988 23768478 ~ 23873924 (-)
XLOC_028802 BX640593.1 non-coding upstream 624818 25840786 ~ 25840902 (-)
XLOC_028804 CT573048.1 non-coding upstream 790474 26006442 ~ 26007456 (-)
XLOC_028807 BX957270.1 non-coding upstream 911209 26127177 ~ 26147550 (-)

Expression


Co-expression Network