XLOC_028804 (CT573048.1)



Basic Information


Item Value
gene id XLOC_028804
gene name CT573048.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 26006442 ~ 26007456 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00055817
TTCACATTGAGGAAAGACCTTCTCACCCGTCCTGAGAGGGAGGATATTCACACTCCTGACCCACTGGAAACACACCGCTGGGGTACAGATCACAGATGGGGACGCTTGGAGGATCCGTTTGGGTTTTGGCTGGGGAGAGAAGGTGGATGTTAATGTGACTTTATATGAGAACACCCCTGTTCACGCAGACAGAGACACATTCACGTGCACACGAGagagtgacagcagtaaaaacaaaccctaaatcaaaactttttaaaatcctgaatcaatattggagttacctttgcacgctggaggaaggatgacaccgtggctgaagtatttctttgagacagg

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097579

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00055817 True 339 lncRNA 0.47 2 26006442 26007456

Neighbor


gene id symbol gene type direction distance location
XLOC_028803 fgd6 coding downstream 94833 25859445 ~ 25911609 (-)
XLOC_028801 nr2c1 coding downstream 147137 25838345 ~ 25859305 (-)
XLOC_028802 BX640593.1 coding downstream 165540 25840786 ~ 25840902 (-)
XLOC_028800 ndufa12 coding downstream 169758 25829841 ~ 25836684 (-)
XLOC_028799 tmcc3 coding downstream 194113 25754725 ~ 25812329 (-)
XLOC_028805 usp44 coding upstream 14293 26021749 ~ 26035770 (-)
XLOC_028806 si:ch211-244b2.3 coding upstream 75074 26082530 ~ 26107841 (-)
XLOC_028807 BX957270.1 coding upstream 119721 26127177 ~ 26147550 (-)
XLOC_028808 NA coding upstream 243418 26250874 ~ 26252121 (-)
XLOC_028809 st8sia1 coding upstream 296157 26303613 ~ 26322836 (-)
XLOC_028797 NA non-coding downstream 509375 25494456 ~ 25497067 (-)
XLOC_028794 NA non-coding downstream 758594 25245031 ~ 25247848 (-)
XLOC_028789 NA non-coding downstream 957435 24833526 ~ 25049007 (-)
XLOC_028788 NA non-coding downstream 1215701 24726095 ~ 24790741 (-)
XLOC_028811 CU137645.1 non-coding upstream 399690 26407146 ~ 26407263 (-)
XLOC_028812 NA non-coding upstream 410051 26417507 ~ 26422227 (-)
XLOC_028813 NA non-coding upstream 744892 26752348 ~ 26765810 (-)

Expression



Co-expression Network