XLOC_028808



Basic Information


Item Value
gene id XLOC_028808
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 26250874 ~ 26252121 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057357
GAAAAAAATCACGCGTTCTCGTCCCGTTTCCAGGTCGCTCCGCTCTAATTGGACGTGCTGCGTGCTTGCGCTGTGATTGGTGCTTGGAGACTGCATCTTTTGAAAAGACGTTTCTGACTCTTCAAACTGTTCTGCATCTTGGGTTTCGGGTCCTCTCCGccattatttcttcattttcaaCGAACGCTGCTGATGCTTTCGAAGGAAAGATTCACTTCTGCTGGATGTAAAGTAAGCAAGGATGCAAACCAACAACATTGTAAGAGTGCAGTTTAGAGAACGGAAGATCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057357 True 290 lncRNA 0.46 2 26250874 26252121

Neighbor


gene id symbol gene type direction distance location
XLOC_028807 BX957270.1 coding downstream 103324 26127177 ~ 26147550 (-)
XLOC_028806 si:ch211-244b2.3 coding downstream 143033 26082530 ~ 26107841 (-)
XLOC_028805 usp44 coding downstream 215104 26021749 ~ 26035770 (-)
XLOC_028804 CT573048.1 coding downstream 243418 26006442 ~ 26007456 (-)
XLOC_028803 fgd6 coding downstream 339265 25859445 ~ 25911609 (-)
XLOC_028809 st8sia1 coding upstream 51492 26303613 ~ 26322836 (-)
XLOC_028810 b4galnt3a coding upstream 138730 26390851 ~ 26413391 (-)
XLOC_028811 CU137645.1 coding upstream 155025 26407146 ~ 26407263 (-)
XLOC_028812 NA coding upstream 165386 26417507 ~ 26422227 (-)
XLOC_028813 NA coding upstream 500227 26752348 ~ 26765810 (-)
XLOC_028802 BX640593.1 non-coding downstream 409972 25840786 ~ 25840902 (-)
XLOC_028797 NA non-coding downstream 753807 25494456 ~ 25497067 (-)
XLOC_028794 NA non-coding downstream 1003026 25245031 ~ 25247848 (-)
XLOC_028814 NA non-coding upstream 586957 26839078 ~ 26839608 (-)
XLOC_028817 CR751234.1 non-coding upstream 889058 27141179 ~ 27141303 (-)

Expression



Co-expression Network