XLOC_002881 (c2cd2)


Basic Information

Item Value
gene id XLOC_002881
gene name c2cd2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33305978 ~ 33343244 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005327
CTCTGTCTATATACAGAAAcatgtgttgtttattttattgtaaaaatgcaGTAGGGACTCTTATTTTGTATCGTCTGGTGACGACTCTGTAGGACTCCCGAACCTCAGTGCAAAGCTAATAATAATCCTCGAAATCAGCGGTGTGTCGCACACATCCACTCTCTTTCCGTTTCTCCTCTTCTTACACGCCCAGGAGGATGAACAAACCCGTTAGAGGACTTGATTATGGCACTTAATATTACTTTTTTGAAACTCTTTTCATTGTTTTCGGTGGCTCGGCTAATGTGATGGTAACGTGGCTCATCAACGCCGGGGGATTTTCAGGAACTTTTCACCTCGGGTGCTCCGGATCTAAGCTTTTATCATTTAGATATATCATTAAATTGCACATAGATGTCAACCATATGTGCAACATTtctaataacaaatatatattttaatagttcTAGGCTTTGTGTCCGATAAGGGACGATTTATCCGGTTAAAATCTCGCAGATTGATTCAATGACGCTACGTTTACTGTGATCTAGCTAACGCTAAACATGCTATTTGATCTGAAAGTAGGTTTGCAGATGCTATAATGTTACACATATCTCATTTAATATATCGTAGTTTGCATTAAAATAGATGTATCTGTCGTGCTGCTTGAAGTGAGATTTACGATCCGCAATCCACCGCTCGCATGTTTTCACCCACCCTCGGTGCGAACTTTCATTTTTGCTGTTTGTGGAGGTGTTTTAACAGCCGATAATTGTAGGAAGGAAAGTGTCGTTGTTGTGTTAGGATGCGGAAGGGTGAGGAGCAGAGCTGAGGGTAAACATGTTAAGGGTTTAAAGCATGTTAATGGCTCGGTGATCATGTCGTCAATGGAGGGTGTTTTCTCCTGGGTGGGAGACTGGCAGTGGCTCTTCATGGTCACTCTCTTTCTGGCCTCGGTTGTCACTTTGGTTGTATACTTGGTGCTGTATTTTTCCAACGAAGCTCATGATGGGAAAACGCATCTCAATCATGTGGATTCAGAGGAAGCTGATGGGATTTTATGTTGGGTGCTTTCCTTGAAAAACTGGAGGAGTCAGTGGAGAAGAGCCTGGTTTAGGAGCCTCAACGAGGAAGCTTGTAGATCACAGAGTGGGATTCAGCTGACCTTTGAAGATGATGGTGTCCAGTCATCAGAACTGGCTGTGGACCAGATTTCAAGCTTCACAAAAACACGGGGTCAAAAGaatgtTCTGTGTCAAGTGGTTGGAAACAAGCTGCAGTTTTCCCTCAGCGCTTTCCCGAGCTCGACGACTTCACAAACCCCCTTGAGATACAGTGTCAAAATTTCTCCACTTCATCTGCAGCTGGCCCTACAGATGAAAGAGGTGAACGGGGAGGTGGAGATTTCCTGGCGGGTGCTTCACCTGGACTCTGTAGATCTGCAGCTGATGCCAAGCTTTGCACAGGGAGATTGTCAGAGTCTAAGTGATGCTGCTGTGACCGACAGGCTCAGACAGGTCTTGAACGGAGCTCAAGCATCTGTAAGTTTGAGCAGCCGGCCCGCAGAATCTGCGGAAGTCAAGGAAGTAAGGAACAAGACCTTACAGGCGACCTCCCCGCCAAAGCCCCCACGAGCTCATGAATGGAAACTGTTAGTGAAGAATATCCGGGTCACATTCACACAGGAGGATGGTGCTGCAGGCGGCATGAATCCTCAATGTATCCTCCAGCTGGATGATCCGCCTCAGAAAATCAACAGTTCAGTGTTGAGTAACAAAAGCAACCCGACGTGGGACCAGCCCTTCATATTTGAGCTTAGCGGCCGGTCAAAGGAGCTGAACATCCAGGTCGTGGATAACGGCAAACCCGTGGAAAGTGGTTTGTTAGGGCAAGTTTCTGTGCCTTTTGATCTGGTGAGGAAACACCCTAAAGGTCAACAGACCTTTTCACTCAAGACCAAAGATCAAGTTACTGGATCAATAACTACTGAGTTCACCTATCTGGAGCCCAATGAGGTGCGTACCTGGCAGACACCCACCCCGGCCCCTACTAAAAGAGTGGAAATGGACCGCACTGTGATGCCCTGTGGCACTGTCGTCACCACTGTTACTGCCGTGAGGAGCAAACCAGGACGACCTTTACCACCCGAATCCAAATCGCCCTCTAAAAATAAGCTGGCAGAGAGAAGGGTGTCGGAGCAGCCGTCAATACTCGGTGCCAAAGTTAGTAAAGCTCTTTCATCGTCAGATACGGAGTTATTGATTCTGAACGGGACAGATCCTGTAGCCGAGGCTGCTATCAGACAGCTGCACGAGTCTGCAAAACAGAAGCTCAAATCTCCCGTCAAAAAGAGCACCATTATCATCTCAGGAGTGTCCAAGGCCCCTCTGTCCCAGGATGAAGAGATGTCACTAATGGCAGGGTATGCAGCGGCCATGGACGCTTCAATGTCCGGAGCAACCGAGGGCACCAACAGCGACCCCTTACCCCCCGAAAAAGTAGAAGAAAACAGCATTATCGAAGCCACAGAGTCCCTGGTGGGTGCAAATGGCACAGACCATGTGGAGGACTGGGAGAGCCAGACTGGAGAAGACCCGGATGCAGATAAAACATCTCTGTCCCTCTGTATCTCTGAAACGGGCTCTAAAAAAGGAAAAGGCAGCTTCCTTCACAAGAGTGCCAAGCTATTCTTCAGACGGAGGCATCAGCGAAAGGAGCCGGGCATGAGCCAGTCCCACAATGACCTCCAGTACCTGGAGCATCCCGAGGCGGCTGTGATGGGTGACAGGGAAAAGAGGACCGCCACCTTCAGGCGCATCATCAACCGCAAACTTCTCCCCAAGAGCAAGAGCAAAACCAACGGCATGCTGAAAGAACCGCCAACGTGA

Function

symbol description
c2cd2 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105000

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005327 True 2867 mRNA 0.48 14 33305978 33343244

Neighbor

gene id symbol gene type direction distance location
XLOC_002880 PRDM15 coding downstream 8114 33269371 ~ 33297864 (-)
XLOC_002879 tbl2 coding downstream 40412 33253952 ~ 33265566 (-)
XLOC_002878 bcl7ba coding downstream 54102 33240410 ~ 33251876 (-)
XLOC_002877 NA coding downstream 141405 33158589 ~ 33164573 (-)
XLOC_002876 cux1a coding downstream 149189 32898533 ~ 33156789 (-)
XLOC_002882 ska2 coding upstream 24111 33367355 ~ 33379850 (-)
XLOC_002883 dre-mir-454a coding upstream 33574 33376818 ~ 33376941 (-)
XLOC_002884 dre-mir-301a coding upstream 33757 33377001 ~ 33377086 (-)
XLOC_002885 dre-mir-130a coding upstream 33886 33377130 ~ 33377214 (-)
XLOC_002886 il2rga coding upstream 201085 33544329 ~ 33557299 (-)
XLOC_002875 NA non-coding downstream 409034 32894997 ~ 32896944 (-)
XLOC_002871 NA non-coding downstream 525688 32779880 ~ 32780290 (-)
XLOC_002870 NA non-coding downstream 627733 32676810 ~ 32678245 (-)
XLOC_002867 NA non-coding downstream 714516 32584685 ~ 32591462 (-)
XLOC_002890 NA non-coding upstream 319921 33663165 ~ 33664789 (-)
XLOC_002891 BX569785.1 non-coding upstream 532887 33876131 ~ 33880364 (-)

Expression


Co-expression Network